RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RAD51Q06609 339 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 CYTH1Q15438 398 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 TCTN1Q2MV58 587 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 FNDC3BQ53EP0 1204 aaKnown RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 PLEKHG4Q58EX7 1191 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SIRPB2Q5JXA9 342 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 LHX8Q68G74 356 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 FAM109BQ6ICB4 259 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 ADGRD1Q6QNK2 874 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 MBOAT1Q6ZNC8 495 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 RFLNAQ6ZTI6 216 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 LYSMD3Q7Z3D4 306 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 TRMT11Q7Z4G4 463 aaKnown RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 OR10Q1Q8NGQ4 319 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SLC25A13Q9UJS0 675 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 HEATR9A2RTY3 570 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 MUSKO15146 869 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 CD3EAPO15446 510 aaKnown RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 TIMM44O43615 452 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 GCATO75600 419 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 KLKB1P03952 638 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 NRIP1P48552 1158 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SYTL3Q4VX76 610 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 PKDCCQ504Y2 493 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 LY6G5CQ5SRR4 150 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 RETSATQ6NUM9 610 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 PKN3Q6P5Z2 889 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 LRRC8BQ6P9F7 803 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 CEP97Q8IW35 865 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 AFAP1L2Q8N4X5 818 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF461Q8TAF7 563 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 DNAJB14Q8TBM8 379 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 NSL1Q96IY1 281 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 NSUN5Q96P11 429 aaKnown RBP8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SEPHS2Q99611 448 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 TRIM62Q9BVG3 475 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 COG4Q9H9E3 785 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 CATSPERZQ9NTU4 200 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 SLC8A2Q9UPR5 921 aa8.13□□□□□ -1.11
CKAP2-203ENST00000378037 A0A0G2JN53 185 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 KANSL1LA0AUZ9 987 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 MATN3O15232 486 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 NCAM2O15394 837 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SPAG6O75602 509 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ESRRBO95718 433 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ADH1AP07327 375 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 GPR17Q13304 367 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 UGP2Q16851 508 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 C18orf21Q32NC0 220 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PAQR3Q6TCH7 311 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PIWIL4Q7Z3Z4 852 aaKnown RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 TMEM25Q86YD3 366 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ARHGAP18Q8N392 663 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PHTF2Q8N3S3 785 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 BANPQ8N9N5 519 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF317Q96PQ6 595 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 OR52B2Q96RD2 323 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 C20orf27Q9GZN8 174 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 TRHDEQ9UKU6 1024 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ITM2BQ9Y287 266 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 DCLK1O15075 740 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 NTRK1P04629 796 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PCNAP12004 261 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 GCAP28676 217 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 NCALDP61601 193 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 MRPS22P82650 360 aaKnown RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 NR6A1Q15406 480 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 GK5Q6ZS86 529 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 DEFB119Q8N690 84 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 GPR156Q8NFN8 814 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 WFDC5Q8TCV5 224 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 LINGO1Q96FE5 620 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 CDRT15Q96T59 188 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 CLSTN3Q9BQT9 956 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ACTR5Q9H9F9 607 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SLC28A3Q9HAS3 691 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 POLR3BQ9NW08 1133 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 CDYLQ9Y232 598 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 VWA7Q9Y334 891 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 MGAMO43451 1857 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 OR6C75A6NL08 312 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PFDN6O15212 129 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 TGM5O43548 720 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF623O75123 536 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 PRAMEF1O95521 474 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ANP32DO95626 131 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 GSNP06396 782 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 HALP42357 657 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 AGTR2P50052 363 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 ERVFC1P60507 584 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms