RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 CBARPQ8N350 705 aaPredicted RBP13.28□□□□□ -0.28
CKAP2-202ENST00000378034 PRELID2Q8N945 189 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 MS4A14Q96JA4 679 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 KLF6Q99612 283 aaPredicted RBP13.28□□□□□ -0.28
CKAP2-202ENST00000378034 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 LRRK1Q38SD2 2015 aa13.28□□□□□ -0.28
CKAP2-202ENST00000378034 PI4KAP42356 2102 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 GON4LQ3T8J9 2241 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 NPIPB15A6NHN6 443 aaPredicted RBP13.27□□□□□ -0.28
CKAP2-202ENST00000378034 ARHGAP33O14559 1287 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 FPGTO14772 594 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 PSMD3O43242 534 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 CTPS1P17812 591 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 HLA-DPA1P20036 260 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 PSMB4P28070 264 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 IRX4P78413 519 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 CNGA3Q16281 694 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 CYP1B1Q16678 543 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 FAM182AQ5T1J6 154 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 DCP2Q8IU60 420 aaKnown RBP13.27□□□□□ -0.28
CKAP2-202ENST00000378034 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.28
CKAP2-202ENST00000378034 CCDC89Q8N998 374 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 CENPTQ96BT3 561 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 FSD1LQ9BXM9 530 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 MAGEE1Q9HCI5 957 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 RNF14Q9UBS8 474 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 SLCO1B1Q9Y6L6 691 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 DOCK9Q9BZ29 2069 aa13.27□□□□□ -0.28
CKAP2-202ENST00000378034 A6NNZ2 444 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 ALPIP09923 528 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 LHCGRP22888 699 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 CSNK1EP49674 416 aaKnown RBP13.27□□□□□ -0.29
CKAP2-202ENST00000378034 C21orf59P57076 290 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 SEMG2Q02383 582 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 GALNT3Q14435 633 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 LRRC14Q15048 493 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 SF3A2Q15428 464 aaKnown RBP13.27□□□□□ -0.29
CKAP2-202ENST00000378034 CRTC1Q6UUV9 634 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.29
CKAP2-202ENST00000378034 ABI3BPQ7Z7G0 1075 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 IPMKQ8NFU5 416 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 COQ10AQ96MF6 247 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 GORASP1Q9BQQ3 440 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 PAK5Q9P286 719 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 PCDH15Q96QU1 1955 aa13.27□□□□□ -0.29
CKAP2-202ENST00000378034 LNP1A1A4G5 178 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 ERI2A8K979 691 aaKnown RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 A8MX80 341 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 TLR4O00206 839 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 WNT9AO14904 365 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 ZNF185O15231 689 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 RECQL5O94762 991 aaPredicted RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 IFNB1P01574 187 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 FGF1P05230 155 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 FDFT1P37268 417 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 ACOX1Q15067 660 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 SLC1A5Q15758 541 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 AASDHQ4L235 1098 aaPredicted RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 GCNT7Q6ZNI0 430 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 GSTA5Q7RTV2 222 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 TP53I13Q8NBR0 393 aaPredicted RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 MAGOHBQ96A72 148 aaKnown RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 KLHDC7BQ96G42 594 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 HACD3Q9P035 362 aa13.26□□□□□ -0.29
CKAP2-202ENST00000378034 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
CKAP2-202ENST00000378034 CACNA1EQ15878 2313 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RGSL1A5PLK6 1076 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RAD51BO15315 384 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 DFNA5O60443 496 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 METTL18O95568 372 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 TUBB4AP04350 444 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 WNT1P04628 370 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ATXN1LP0C7T5 689 aaKnown RBP13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ENGP17813 658 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 CASQ1P31415 396 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ADRA1AP35348 466 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RABIFP47224 123 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 YPEL5P62699 121 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 PTSQ03393 145 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 GRIK2Q13002 908 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 CDKN3Q16667 212 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 SIRPB2Q5JXA9 342 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 LRRC66Q68CR7 880 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 NYAP1Q6ZVC0 841 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 TSPAN33Q86UF1 283 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 NLRP8Q86W28 1048 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
CKAP2-202ENST00000378034 BMFQ96LC9 184 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms