RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SRP72O76094 671 aaKnown RBP25.37■■□□□ 1.65
C9orf40-201ENST00000376854 S1PR4O95977 384 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MMP2P08253 660 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 NDST2P52849 883 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 FAM45BPQ6NSW5 357 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 CYHR1Q6ZMK1 362 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 LARP4Q71RC2 724 aaKnown RBP eCLIP25.37■■□□□ 1.65
C9orf40-201ENST00000376854 ISCA2Q86U28 154 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 SERINC5Q86VE9 423 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 FAM45AQ8TCE6 357 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 L3HYPDHQ96EM0 354 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MARCH4Q9P2E8 410 aaPredicted RBP25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MTF2Q9Y483 593 aaPredicted RBP25.37■■□□□ 1.65
C9orf40-201ENST00000376854 SCN10AQ9Y5Y9 1956 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MROH6A6NGR9 719 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 OR51F1A6NGY5 319 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 OR4Q2P0C623 313 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 HAPLN1P10915 354 aaPredicted RBP25.36■■□□□ 1.65
C9orf40-201ENST00000376854 PSMC3P17980 439 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 TUSC3Q13454 348 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 IHHQ14623 411 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SAMD4BQ5PRF9 694 aaKnown RBP25.36■■□□□ 1.65
C9orf40-201ENST00000376854 CYP2R1Q6VVX0 501 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SLCO4A1Q96BD0 722 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 FBRSL1Q9HCM7 1045 aaKnown RBP25.36■■□□□ 1.65
C9orf40-201ENST00000376854 TMEM181Q9P2C4 612 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 PADI3Q9ULW8 664 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 ZNF623O75123 536 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 TRPA1O75762 1119 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 WISP3O95389 354 aaPredicted RBP25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SPATA31D3P0C874 917 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 USP41Q3LFD5 358 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SPATA31D4Q6ZUB0 917 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 ZNF354CQ86Y25 554 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 HERC6Q8IVU3 1022 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 RIN3Q8TB24 985 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SOCS4Q8WXH5 440 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 C19orf60Q96EN9 201 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 MPP4Q96JB8 637 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SP110Q9HB58 689 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 ETAA1Q9NY74 926 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 PTTG2Q9NZH5 202 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 TLR6Q9Y2C9 796 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 SNX13Q9Y5W8 968 aa25.36■■□□□ 1.65
C9orf40-201ENST00000376854 TCRBV3S1A0A5B6 114 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 C7orf72A4D263 438 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 CCDC160A6NGH7 325 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 H0YJX3 145 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 PENKP01210 267 aaPredicted RBP25.35■■□□□ 1.65
C9orf40-201ENST00000376854 THPOP40225 353 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SLC26A3P40879 764 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 APOFQ13790 326 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 C6orf10Q5SRN2 563 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 KLHDC10Q6PID8 442 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SH3RF2Q8TEC5 729 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SUSD3Q96L08 255 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 ZNF597Q96LX8 424 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 RGS18Q9NS28 235 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 CRYL1Q9Y2S2 319 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 KCTD3Q9Y597 815 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 RHOQP17081 205 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 FGFR3P22607 806 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SLC7A1P30825 629 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 STX1BP61266 288 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 CREB5Q02930 508 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 MYLK3Q32MK0 819 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 UNC50Q53HI1 259 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SIRPB2Q5JXA9 342 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 C8orf82Q6P1X6 216 aaPredicted RBP25.35■■□□□ 1.65
C9orf40-201ENST00000376854 HACD2Q6Y1H2 254 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 C3orf30Q96M34 536 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 ZYG11BQ9C0D3 744 aa25.35■■□□□ 1.65
C9orf40-201ENST00000376854 SLC4A1P02730 911 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ACADVLP49748 655 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ATP4BP51164 291 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 YWHAHQ04917 246 aaPredicted RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 CACNB2Q08289 660 aaPredicted RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 IKBKEQ14164 716 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 CHERPQ8IWX8 916 aaKnown RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 OR52K2Q8NGK3 314 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 DDI1Q8WTU0 396 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 EXT2Q93063 718 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 PSMG2Q969U7 264 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 PTERQ96BW5 349 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 SLC39A3Q9BRY0 314 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 PRDM5Q9NQX1 630 aaPredicted RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 UXTQ9UBK9 157 aaPredicted RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 CNTN5O94779 1100 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 SLC7A2P52569 658 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 HERVK_113P63132 956 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 SLC39A12Q504Y0 691 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ALFQ53S48 1182 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 MTX3Q5HYI7 312 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 SDHAF4Q5VUM1 108 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 IFNL1Q8IU54 200 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ZNF683Q8IZ20 524 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ZFP28Q8NHY6 868 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 FATE1Q969F0 183 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 PBXIP1Q96AQ6 731 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 DUS3LQ96G46 650 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms