RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GPR158Q5T848 1215 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 PIM3Q86V86 326 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
VSX1-202ENST00000376709 RMDN1Q96DB5 314 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 LENG8Q96PV6 779 aaPredicted RBP20.28■□□□□ 0.84
VSX1-202ENST00000376709 YY1AP1Q9H869 796 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 TMEM39AQ9NV64 488 aa20.28■□□□□ 0.84
VSX1-202ENST00000376709 TMEM233B4DJY2 109 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 CBX4O00257 560 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 TSPAN3O60637 253 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 PMLP29590 882 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 CDC25CP30307 473 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 VHLP40337 213 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 EPHB1P54762 984 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 ZRSR2Q15696 482 aaKnown RBP20.27■□□□□ 0.84
VSX1-202ENST00000376709 MUM1Q2TAK8 710 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 ADGRF1Q5T601 910 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 DEFB107AQ8IZN7 70 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 KDM1BQ8NB78 822 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 OR4L1Q8NH43 312 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 PHF21BQ96EK2 531 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 NAF1Q96HR8 494 aaKnown RBP20.27■□□□□ 0.84
VSX1-202ENST00000376709 TRIB3Q96RU7 358 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 CATSPERZQ9NTU4 200 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 LRRC42Q9Y546 428 aa20.27■□□□□ 0.84
VSX1-202ENST00000376709 A0A1B0GVM2 712 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 ILVBLA1L0T0 632 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 TCAF2A6NFQ2 919 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 TRPC5OSA6NMA1 111 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 CRTAMO95727 393 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 KCNA5P22460 613 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 PPARGP37231 505 aaPredicted RBP20.27■□□□□ 0.83
VSX1-202ENST00000376709 RGRP47804 291 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 SDCCAG8Q86SQ7 713 aaPredicted RBP20.27■□□□□ 0.83
VSX1-202ENST00000376709 SHKBP1Q8TBC3 707 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 ACTRT2Q8TDY3 377 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 RNF38Q9H0F5 515 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 MUC3BQ9H195 1237 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 ALG9Q9H6U8 611 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 EML4Q9HC35 981 aaKnown RBP20.27■□□□□ 0.83
VSX1-202ENST00000376709 SCUBE2Q9NQ36 999 aa20.27■□□□□ 0.83
VSX1-202ENST00000376709 C2orf78A6NCI8 922 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 INSIG1O15503 277 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 THRAP10827 490 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 ITGAXP20702 1163 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 PIK3R1P27986 724 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 SLC26A3P40879 764 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 ILF2Q12905 390 aaKnown RBP20.26■□□□□ 0.83
VSX1-202ENST00000376709 RFTN1Q14699 578 aaPredicted RBP20.26■□□□□ 0.83
VSX1-202ENST00000376709 TMEM207Q6UWW9 146 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 LRRC74BQ6ZQY2 392 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 CHST9Q7L1S5 443 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 C16orf59Q7L2K0 433 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 SETD3Q86TU7 594 aaPredicted RBP20.26■□□□□ 0.83
VSX1-202ENST00000376709 SLC22A9Q8IVM8 553 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 GPR150Q8NGU9 434 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 NRG4Q8WWG1 115 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 STON2Q8WXE9 905 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 MYRFLQ96LU7 910 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 RTKNQ9BST9 563 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 CCDC28BQ9BUN5 200 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 CRISPLD2Q9H0B8 497 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 CDH22Q9UJ99 828 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 AGO1Q9UL18 857 aaKnown RBP20.26■□□□□ 0.83
VSX1-202ENST00000376709 FIS1Q9Y3D6 152 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 YIPF1Q9Y548 306 aa20.26■□□□□ 0.83
VSX1-202ENST00000376709 ABLIM3O94929 683 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 SOD2P04179 222 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 NSUN2Q08J23 767 aaKnown RBP eCLIP20.25■□□□□ 0.83
VSX1-202ENST00000376709 VEPH1Q14D04 833 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 TMEM198Q66K66 360 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 TRIM68Q6AZZ1 485 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 CATSPER2Q96P56 530 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 NMRK1Q9NWW6 199 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 CORO1CQ9ULV4 474 aaPredicted RBP20.25■□□□□ 0.83
VSX1-202ENST00000376709 NVLO15381 856 aaKnown RBP20.25■□□□□ 0.83
VSX1-202ENST00000376709 PDE5AO76074 875 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 GCKP35557 465 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 AP2B1P63010 937 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 TBL3Q12788 808 aaKnown RBP20.25■□□□□ 0.83
VSX1-202ENST00000376709 SEMA3AQ14563 771 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 TPGS2Q68CL5 300 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 GLT6D1Q7Z4J2 308 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 AFAP1L2Q8N4X5 818 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 DNAJC9Q8WXX5 260 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 CCDC124Q96CT7 223 aaKnown RBP20.25■□□□□ 0.83
VSX1-202ENST00000376709 SMPD4Q9NXE4 827 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 HSFX1Q9UBD0 423 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 ANGPTL2Q9UKU9 493 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 RIMKLBQ9ULI2 386 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 WASF2Q9Y6W5 498 aa20.25■□□□□ 0.83
VSX1-202ENST00000376709 RGSL1A5PLK6 1076 aa20.24■□□□□ 0.83
VSX1-202ENST00000376709 PRRG1O14668 218 aa20.24■□□□□ 0.83
VSX1-202ENST00000376709 HOXB8P17481 243 aaPredicted RBP20.24■□□□□ 0.83
VSX1-202ENST00000376709 OGNP20774 298 aaKnown RBP20.24■□□□□ 0.83
VSX1-202ENST00000376709 FDXRP22570 491 aa20.24■□□□□ 0.83
VSX1-202ENST00000376709 STC1P52823 247 aa20.24■□□□□ 0.83
VSX1-202ENST00000376709 DEFB103AP81534 67 aa20.24■□□□□ 0.83
VSX1-202ENST00000376709 RNF219Q5W0B1 726 aaPredicted RBP20.24■□□□□ 0.83
VSX1-202ENST00000376709 ZNF549Q6P9A3 640 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms