RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NCKAP1Q9Y2A7 1128 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ZNF711Q9Y462 761 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 MROH6A6NGR9 719 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 SLC7A4O43246 635 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 LDB2O43679 373 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 SPAG6O75602 509 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 USP1O94782 785 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 PRKCGP05129 697 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 GABRG2P18507 467 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 NDUFV2P19404 249 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 LPOP22079 712 aaPredicted RBP22.98■■□□□ 1.27
HLA-C-202ENST00000376237 VIPR1P32241 457 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 HMGCLP35914 325 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 SEPT6Q14141 434 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 SPDYCQ5MJ68 293 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 DPPA4Q7L190 304 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 IGDCC3Q8IVU1 814 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 TSTD1Q8NFU3 115 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 STYXQ8WUJ0 223 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 FAM131CQ96AQ9 280 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 WDR83Q9BRX9 315 aaKnown RBP22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ARFGAP3Q9NP61 516 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 FBXL12Q9NXK8 326 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 B4GALT6Q9UBX8 382 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ATG2BQ96BY7 2078 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 C1orf232A0A0U1RR37 186 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 NPIPB15A6NHN6 443 aaPredicted RBP22.97■■□□□ 1.27
HLA-C-202ENST00000376237 AREL1O15033 823 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 AP1G1O43747 822 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 ARHGEF7Q14155 803 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 CDKN3Q16667 212 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 KYNUQ16719 465 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 SKIDA1Q1XH10 827 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 PIP5KL1Q5T9C9 394 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 CWF19L1Q69YN2 538 aaKnown RBP22.97■■□□□ 1.27
HLA-C-202ENST00000376237 CRTC1Q6UUV9 634 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 MREGQ8N565 214 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 SMIM14Q96QK8 99 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 SEMA4AQ9H3S1 761 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 FZD4Q9ULV1 537 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 RPS6KL1Q9Y6S9 549 aa22.97■■□□□ 1.27
HLA-C-202ENST00000376237 H0Y858 1186 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 RNASEH2AO75792 299 aaKnown RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 DCNP07585 359 aaKnown RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 PAMP19021 973 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 AOC1P19801 751 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 MMP12P39900 470 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 CLCN5P51795 746 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 ANKRD20A4Q4UJ75 823 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 SPANXN3Q5MJ09 141 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 BEND6Q5SZJ8 279 aaPredicted RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 TSTD2Q5T7W7 516 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 KIAA1324Q6UXG2 1013 aaKnown RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 LYSMD3Q7Z3D4 306 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 CACUL1Q86Y37 369 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 RAVER1Q8IY67 606 aaKnown RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 TTC30BQ8N4P2 665 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 CAMKK1Q8N5S9 505 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 GANCQ8TET4 914 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 LRRC4CQ9HCJ2 640 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 POLR3BQ9NW08 1133 aaPredicted RBP22.96■■□□□ 1.27
HLA-C-202ENST00000376237 NINJ2Q9NZG7 142 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 PKP3Q9Y446 797 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 ARL5AQ9Y689 179 aa22.96■■□□□ 1.27
HLA-C-202ENST00000376237 A0A1W2PP55 124 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 TMEM221A6NGB7 291 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 M0R296 226 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 AURKAO14965 403 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 PSMA3P25788 255 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 PHBP35232 272 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 HADHAP40939 763 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 MTAPQ13126 283 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 AGBL4Q5VU57 503 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 STEAP4Q687X5 459 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 LRRC66Q68CR7 880 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 C3orf62Q6ZUJ4 267 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 PGBD3Q8N328 593 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 HMGB4Q8WW32 186 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 SLC6A17Q9H1V8 727 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 DLGAP2Q9P1A6 1054 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 BCCIPQ9P287 314 aaKnown RBP eCLIP22.95■■□□□ 1.26
HLA-C-202ENST00000376237 FAM169AQ9Y6X4 670 aa22.95■■□□□ 1.26
HLA-C-202ENST00000376237 PSMD11O00231 422 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 NEMP1O14524 444 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 STX7O15400 261 aaKnown RBP22.94■■□□□ 1.26
HLA-C-202ENST00000376237 TSPAN6O43657 245 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 CLDN7O95471 211 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 CXCL12P48061 93 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 CCR3P51677 355 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 ACVR1Q04771 509 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 CRYMQ14894 314 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 PTPRRQ15256 657 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 TMEM52BQ4KMG9 183 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 LRRC73Q5JTD7 316 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 UNC5AQ6ZN44 842 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 CYS1Q717R9 158 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 PBXIP1Q96AQ6 731 aa22.94■■□□□ 1.26
HLA-C-202ENST00000376237 ZNF669Q96BR6 464 aaPredicted RBP22.94■■□□□ 1.26
HLA-C-202ENST00000376237 MFSD3Q96ES6 412 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms