RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 FBXW8Q8N3Y1 598 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 DDHD1Q8NEL9 900 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TMEM216Q9P0N5 145 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 RPS6KB2Q9UBS0 482 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SGTAO43765 313 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TNNI3P19429 210 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 IL1R2P27930 398 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SERPINB1P30740 379 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 MAPK9P45984 424 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 DPYSL2Q16555 572 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ANKS1BQ7Z6G8 1248 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SCAMP5Q8TAC9 235 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 NDEL1Q9GZM8 345 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 RIBC2Q9H4K1 309 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 CCL22O00626 93 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TMEM63AO94886 807 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 KRT8P05787 483 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 GSNP06396 782 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 PBX3P40426 434 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 MPP1Q00013 466 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 NCF4Q15080 339 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TXNRD3NBQ6F5E7 133 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ESRP1Q6NXG1 681 aaKnown RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 PLEKHM3Q6ZWE6 761 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SETD9Q8NE22 299 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 APOL4Q9BPW4 351 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TCAF1Q9Y4C2 921 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 H3BN98 237 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 BMP10O95393 424 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 UGT2B4P06133 528 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 CXCR2P25025 360 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 NEDD8Q15843 81 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 CHPFQ8IZ52 775 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 MAGEE2Q8TD90 523 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-203ENST00000375851 TEKT5Q96M29 485 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 REEP1Q9H902 201 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 ACSS2Q9NR19 701 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
C9orf47-203ENST00000375851 FAM20BO75063 409 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CRHR2Q13324 411 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 KIAA0408Q6ZU52 694 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 RAD21L1Q9H4I0 556 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CACNG4Q9UBN1 327 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PRKAG3Q9UGI9 489 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ENTPD4Q9Y227 616 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 GUCY1B2O75343 617 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 ELFN1P0C7U0 828 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 RPL17P18621 184 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CRATP43155 626 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 KLF10Q13118 480 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TRIM16LQ309B1 348 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 TRMT10BQ6PF06 316 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CLEC20AQ6ZU45 233 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 GPR180Q86V85 440 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CDK20Q8IZL9 346 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PROX1Q92786 737 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 C7orf26Q96N11 449 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 KLHL20Q9Y2M5 609 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 SLC28A1O00337 649 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 PLIN3O60664 434 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 IDO1P14902 403 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
C9orf47-203ENST00000375851 DLG2Q15700 870 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 DCAF12L1Q5VU92 463 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
C9orf47-203ENST00000375851 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms