RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 HIP1O00291 1037 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 WDR46O15213 610 aaKnown RBP9.08□□□□□ -0.96
UBR4-201ENST00000375218 PFKFB2O60825 505 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 METTL18O95568 372 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 SERPINF1P36955 418 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 GABPAQ06546 454 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 OVGP1Q12889 678 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 SLAQ13239 276 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 SGSM1Q2NKQ1 1148 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 ATG16L1Q676U5 607 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 KIAA2013Q8IYS2 634 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
UBR4-201ENST00000375218 TTLL6Q8N841 843 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 LIPHQ8WWY8 451 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 CGRRF1Q99675 332 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 HIPK3Q9H422 1215 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
UBR4-201ENST00000375218 CNIH4Q9P003 139 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 SLC9A8Q9Y2E8 581 aa9.08□□□□□ -0.96
UBR4-201ENST00000375218 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 PODXLO00592 558 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 HTRA2O43464 458 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 TGM5O43548 720 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 OTCP00480 354 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 KITP10721 976 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 C5AR1P21730 350 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZNF157P51786 506 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 SEC23BQ15437 767 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ALX1Q15699 326 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ERMARDQ5T6L9 678 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 SELENOHQ8IZQ5 122 aaKnown RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 RUBCNLQ9H714 662 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 SP140LQ9H930 580 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ANKMY1Q9P2S6 941 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CNTNAP1P78357 1384 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 A0A1W2PN81 502 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 DNM1LO00429 736 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CASC3O15234 703 aaKnown RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZNF888P0CJ79 500 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 CHRNA7P36544 502 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CYP24A1Q07973 514 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 TROAPQ12815 778 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 VASH2Q86V25 355 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 POTEDQ86YR6 584 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 KBTBD2Q8IY47 623 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 MAB21L3Q8N8X9 362 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZNF560Q96MR9 790 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 SLC6A15Q9H2J7 730 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 C17orf75Q9HAS0 396 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 SEPSECSQ9HD40 501 aaKnown RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 PNO1Q9NRX1 252 aaKnown RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 CCM2LQ9NUG4 571 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 TMEM160Q9NX00 188 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 DNAJC28Q9NX36 388 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 KLHL14Q9P2G3 628 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 DNAJB11Q9UBS4 358 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 PCDHB14Q9Y5E9 798 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CCDC154A6NI56 674 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 STX10O60499 249 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 TADA2AO75478 443 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 MT-ATP6P00846 226 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 IL6P05231 212 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 TIMP2P16035 220 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 CD97P48960 835 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZNF165P49910 485 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 GLO1Q04760 184 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 ZNF829Q3KNS6 432 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 APOBEC3HQ6NTF7 200 aaKnown RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
UBR4-201ENST00000375218 ASPGQ86U10 573 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 OR52E1Q8NGJ3 308 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 SLC44A1Q8WWI5 657 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 DYNLL2Q96FJ2 89 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 PCDHGB1Q9Y5G3 927 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 FADS3Q9Y5Q0 445 aa9.07□□□□□ -0.96
UBR4-201ENST00000375218 A0A1W2PRG0 241 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 AGRPO00253 132 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 PRPF4O43172 522 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBR4-201ENST00000375218 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
UBR4-201ENST00000375218 ADH1CP00326 375 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 OPN1LWP04000 364 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 HMGN1P05114 100 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 CORO1AP31146 461 aaKnown RBP9.06□□□□□ -0.96
UBR4-201ENST00000375218 ICAM3P32942 547 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 NPY4RP50391 375 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 PER3P56645 1201 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 S100A12P80511 92 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 ZP2Q05996 745 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 GPM6BQ13491 265 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 NDUFA5Q16718 116 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 PRAMEF14Q5SWL7 426 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
UBR4-201ENST00000375218 ZNF679Q8IYX0 411 aa9.06□□□□□ -0.96
UBR4-201ENST00000375218 CELF5Q8N6W0 485 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms