RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FIBINQ8TAL6 211 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SHKBP1Q8TBC3 707 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 USP13Q92995 863 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NXNL1Q96CM4 212 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SCYL1Q96KG9 808 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NDNQ99608 321 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MRPL46Q9H2W6 279 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 IGSF5Q9NSI5 407 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HACD3Q9P035 362 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KIAA1522Q9P206 1035 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MARCOQ9UEW3 520 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 VWA7Q9Y334 891 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PCDHGC4Q9Y5F7 938 aa18.05■□□□□ 0.48
HLA-DQB1-201ENST00000374943 C2orf81A6NN90 581 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ANKRD66B4E2M5 251 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 C5orf67F2Z3F1 127 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TRAFD1O14545 582 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KITP10721 976 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GJA1P17302 382 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 EN2P19622 333 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CCR2P41597 374 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CSNK1DP48730 415 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 STC1P52823 247 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PLK1P53350 603 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PGGT1BP53609 377 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NAPRTQ6XQN6 538 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 APCDD1Q8J025 514 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MDGA1Q8NFP4 955 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GATA5Q9BWX5 397 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SUDS3Q9H7L9 328 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 POPDC3Q9HBV1 291 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 INTS10Q9NVR2 710 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CPSF2Q9P2I0 782 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 XPR1Q9UBH6 696 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LNPEPQ9UIQ6 1025 aa18.04■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FCHO1O14526 889 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LPOP22079 712 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TARSP26639 723 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GLRBP48167 497 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RASSF2P50749 326 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ASPHQ12797 758 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LMAN2Q12907 356 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PTPRCAPQ14761 206 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FAM83EQ2M2I3 478 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 AGAP9Q5VTM2 703 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FBXW10Q5XX13 1052 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SDCCAG8Q86SQ7 713 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LEMD2Q8NC56 503 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HEXDCQ8WVB3 486 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LMLNQ96KR4 655 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 UBXN10Q96LJ8 280 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DNAJC28Q9NX36 388 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FCF1Q9Y324 198 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ATG2AQ2TAZ0 1938 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 BUD23O43709 281 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CCDC22O60826 627 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MOSPD3O75425 235 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LTA4HP09960 611 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PTPN2P17706 415 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FDXRP22570 491 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MAPK8P45983 427 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GRIA4P48058 902 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SUOXP51687 545 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HK2P52789 917 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SEMA3AQ14563 771 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TTC31Q49AM3 519 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TECRLQ5HYJ1 363 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GPR158Q5T848 1215 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LDB1Q86U70 411 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OR4K2Q8NGD2 314 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SH3RF2Q8TEC5 729 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TMEM237Q96Q45 408 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TCF12Q99081 682 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 DRC3Q9H069 523 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 GPAMQ9HCL2 828 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MAN1C1Q9NR34 630 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HCFC1R1Q9NWW0 138 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HAO1Q9UJM8 370 aa18.03■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 H7C0S8 307 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF195O14628 629 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 DLX3O60479 287 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SNUPNO95149 360 aaKnown RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HSPA4LO95757 839 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MT-CO1P00395 513 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CYBBP04839 570 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HNRNPA1P09651 372 aaKnown RBP eCLIP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CDKN2DP55273 166 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 DNAJB13P59910 316 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RPL26P61254 145 aaKnown RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 KCNJ2P63252 427 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ELF3P78545 371 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC20A2Q08357 652 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TUBB3Q13509 450 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PLEKHG6Q3KR16 790 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ARHGAP15Q53QZ3 475 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CYB5D1Q6P9G0 228 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ALYREFQ86V81 257 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms