RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 STYXQ8WUJ0 223 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 HTR3CQ8WXA8 447 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 TMEM143Q96AN5 459 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 SP140LQ9H930 580 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 ABCB10Q9NRK6 738 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 GMIPQ9P107 970 aa20.64■□□□□ 0.9
TMEFF1-201ENST00000374879 H0YAE9 185 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 AP3B1O00203 1094 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 MICAL2O94851 1124 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 ABCB1P08183 1280 aaPredicted RBP20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 ARL1P40616 181 aaPredicted RBP20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 NAMPTP43490 491 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 SKIV2LQ15477 1246 aaKnown RBP20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 HIST2H2ACQ16777 129 aaPredicted RBP20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 SLX4IPQ5VYV7 408 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 HACD2Q6Y1H2 254 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 UBA3Q8TBC4 463 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 MED30Q96HR3 178 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 TLK1Q9UKI8 766 aa20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 MTF2Q9Y483 593 aaPredicted RBP20.64■□□□□ 0.89
TMEFF1-201ENST00000374879 A0A0A0MRY4 1105 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 TTC24A2A3L6 582 aaPredicted RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 M0R3G1 203 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 PARNO95453 639 aaKnown RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 MTHFD1P11586 935 aaKnown RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 GFAPP14136 432 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 EMC2Q15006 297 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 ZNF699Q32M78 642 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 TSTD2Q5T7W7 516 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 OR6B2Q6IFH4 312 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 LCN8Q6JVE9 175 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 ABHD15Q6UXT9 468 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 SPATA6LQ8N4H0 392 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 OR7A2PQ8NGA2 310 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 VPS39Q96JC1 886 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 SPATA13Q96N96 652 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 LGMNQ99538 433 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 TRIM8Q9BZR9 551 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 TNFRSF12AQ9NP84 129 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 MAGED2Q9UNF1 606 aaPredicted RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 ZFC3H1O60293 1989 aaKnown RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 TARM1B6A8C7 271 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 K7ERI5 159 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 INPP4BO15327 924 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 MT-CO1P00395 513 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 SPNP16150 400 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 CD68P34810 354 aaPredicted RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 SOX11P35716 441 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 GP2P55259 537 aaKnown RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 RACK1P63244 317 aaKnown RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 GRM3Q14832 879 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 ADPRMQ3LIE5 342 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 RSBN1Q5VWQ0 802 aaPredicted RBP20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 HCAR2Q8TDS4 363 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 BHMTQ93088 406 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 MUL1Q969V5 352 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 SPATA17Q96L03 361 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 ZNF670Q9BS34 389 aa20.63■□□□□ 0.89
TMEFF1-201ENST00000374879 M0QYV0 167 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ARPC2O15144 300 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 CRYZL1O95825 349 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 DLGAP3O95886 979 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 PSMB4P28070 264 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ALDH7A1P49419 539 aaKnown RBP20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 IST1P53990 364 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 VAC14Q08AM6 782 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 SNX17Q15036 470 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 XKR3Q5GH77 459 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 LINC00299Q6ZSB3 139 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 DPH6Q7L8W6 267 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ADCK1Q86TW2 530 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 FUNDC1Q8IVP5 155 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 PIK3C3Q8NEB9 887 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 TWNKQ96RR1 684 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 OSBPL2Q9H1P3 480 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 INTS10Q9NVR2 710 aaKnown RBP20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ACTR3BQ9P1U1 418 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 MAP10Q9P2G4 905 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 CRNNQ9UBG3 495 aaPredicted RBP20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 XPR1Q9UBH6 696 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ITM2BQ9Y287 266 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 MAN1A2O60476 641 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 TOMM70O94826 608 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 ALX3O95076 343 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 SEPHS1P49903 392 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 AP3M2P53677 418 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 CAPRIN1Q14444 709 aaKnown RBP20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 FAM183BPQ6ZVS7 135 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 LYSMD2Q8IV50 215 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 TSNARE1Q96NA8 513 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 HMGXB4Q9UGU5 601 aa20.62■□□□□ 0.89
TMEFF1-201ENST00000374879 GOLGA8CPA6NN73 597 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 USP12O75317 370 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 GSNP06396 782 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 BACE1P56817 501 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 DGUOKQ16854 277 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 RBM48Q5RL73 367 aaKnown RBP20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 RALGPS2Q86X27 583 aaPredicted RBP20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 WDR49Q8IV35 697 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 OR52K1Q8NGK4 314 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms