RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PRYO14603 147 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 NEMFO60524 1076 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 USP12O75317 370 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 CCNE2O96020 404 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 FAM90A13PP0C7W8 464 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 FAM90A24PP0C7X0 464 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 ST6GAL1P15907 406 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 GCFC2P16383 781 aaKnown RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 CAPN2P17655 700 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 NDUFS1P28331 727 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 IDUAP35475 653 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 GSTM5P46439 218 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 SLC12A2P55011 1212 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 ACTR2P61160 394 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 TLE2Q04725 743 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 MTA1Q13330 715 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 GAB1Q13480 694 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 ARL13BQ3SXY8 428 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 CCDC144NLQ6NUI1 221 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 HIBCHQ6NVY1 386 aaPredicted RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 MOXD1Q6UVY6 613 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 TRMT1LQ7Z2T5 733 aaKnown RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 ZNF548Q8NEK5 533 aaPredicted RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 PJA1Q8NG27 643 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 ETNPPLQ8TBG4 499 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 WIPF2Q8TF74 440 aaPredicted RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 OVCA2Q8WZ82 227 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 KAT2BQ92831 832 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 MBOAT7Q96N66 472 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 SENP7Q9BQF6 1050 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 C16orf70Q9BSU1 422 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 TEKT3Q9BXF9 490 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
PMS1-202ENST00000374826 TRPV6Q9H1D0 765 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 UNC45AQ9H3U1 944 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 HDAC6Q9UBN7 1215 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 HS3ST3B1Q9Y662 390 aa4.79□□□□□ -1.64
PMS1-202ENST00000374826 UMODL1Q5DID0 1318 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 MROH7Q68CQ1 1323 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 IGSF9BQ9UPX0 1349 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CYP3A7-CYP3A51PA0A087WV96 503 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 H3BNX3 289 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 HAS3O00219 553 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 NCK2O43639 380 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 PSMD10O75832 226 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CABYRO75952 493 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 VIPP01282 170 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CLTBP09497 229 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 SUPT20HL2P0C7V6 817 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 SMIM10L2AP0DMW4 78 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 SMIM10L2BP0DMW5 78 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 HARSP12081 509 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 SYT1P21579 422 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 TNFSF4P23510 183 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CYP3A7P24462 503 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 U2AF2P26368 475 aaKnown RBP eCLIP4.78□□□□□ -1.64
PMS1-202ENST00000374826 HOXD12P35452 270 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 ME1P48163 572 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 HTR6P50406 440 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CDK7P50613 346 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
PMS1-202ENST00000374826 ELF2Q15723 593 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 CALCRLQ16602 461 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 UGCGQ16739 394 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 P3H1Q32P28 736 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 NCAPH2Q6IBW4 605 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 ACSM6Q6P461 480 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 NFRKBQ6P4R8 1299 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 FAM57BQ71RH2 274 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 MIER3Q7Z3K6 550 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 PIM3Q86V86 326 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 UEVLDQ8IX04 471 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 GLIS1Q8NBF1 620 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 BCAS4Q8TDM0 211 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 TRAPPC12Q8WVT3 735 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 SEPT1Q8WYJ6 367 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 ZBTB10Q96DT7 871 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 PCYT2Q99447 389 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 EIF3CQ99613 913 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 GDF15Q99988 308 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 KATNAL1Q9BW62 490 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 HIPK2Q9H2X6 1198 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 AZI2Q9H6S1 392 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 KCNMB3Q9NPA1 279 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 TBC1D22BQ9NU19 505 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 TMEM45AQ9NWC5 275 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 ZNF215Q9UL58 517 aaPredicted RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 NOL7Q9UMY1 257 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 SQORQ9Y6N5 450 aa4.78□□□□□ -1.64
PMS1-202ENST00000374826 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 LAMA2P24043 3122 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 MTCL1Q9Y4B5 1905 aaKnown RBP4.78□□□□□ -1.64
PMS1-202ENST00000374826 LAMA3Q16787 3333 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 FAM234BA2RU67 622 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms