RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ARMC8Q8IUR7 673 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 HELQQ8TDG4 1101 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 LPPQ93052 612 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CAPNS2Q96L46 248 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 LHX5Q9H2C1 402 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 LYVE1Q9Y5Y7 322 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CA12O43570 354 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 UMPSP11172 480 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ITGA2P17301 1181 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP2A13Q16696 494 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 AMIGO2Q86SJ2 522 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 PEG10Q86TG7 708 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM20CQ8IXL6 584 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF558Q96NG5 402 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 TKTL2Q9H0I9 626 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 SNX6Q9UNH7 406 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 POLR1DQ9Y2S0 133 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 C10orf71Q711Q0 1435 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 CST1P01037 141 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ERBB2P04626 1255 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 NPNTQ6UXI9 565 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 AP3S1Q92572 193 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ACE2Q9BYF1 805 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 SEPT4O43236 478 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 TREHO43280 583 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 RPN2P04844 631 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ELNP15502 786 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 KLRC2P26717 231 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 MBTD1Q05BQ5 628 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 QRFPRQ96P65 431 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 MRPL57Q9BQC6 102 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 ENTPD4Q9Y227 616 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 TSPAN1O60635 241 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 CRADDP78560 199 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 STXBP5Q5T5C0 1151 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 LIPMQ5VYY2 423 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 GCNT7Q6ZNI0 430 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 DPF3Q92784 378 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 MTFMTQ96DP5 389 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 RAPGEFL1Q9UHV5 662 aa12.32□□□□□ -0.44
NPLOC4-202ENST00000374747 IGSF6O95976 241 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 ANXA5P08758 320 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TUSC3Q13454 348 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 AKAP14Q86UN6 197 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TMEM199Q8N511 208 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 CORO2BQ9UQ03 480 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 MRPS7Q9Y2R9 242 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 CLUHO75153 1309 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 SMIM28A0A1B0GU29 152 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 NDUFB5O43674 189 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 OR6A2O95222 327 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TNNI3P19429 210 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PSEN1P49768 467 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 DPYSQ14117 519 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TRABD2AQ86V40 505 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PQLC1Q8N2U9 271 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 OR52L1Q8NGH7 329 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 RNASE11Q8TAA1 199 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 FBXO6Q9NRD1 293 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 FGF10O15520 208 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 GUCY1B2O75343 617 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 NOL4O94818 638 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 NTRK1P04629 796 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 ITGA2BP08514 1039 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 ACLYP53396 1101 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 RHAGQ02094 409 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PUDPQ08623 228 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 RIPK1Q13546 671 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 C15orf59Q2T9L4 293 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC38A2Q96QD8 506 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TIMMDC1Q9NPL8 285 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PTGFRNQ9P2B2 879 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TBC1D30Q9Y2I9 924 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 MTRF1O75570 445 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TRUB2O95900 331 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 SERPINA1P01009 418 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 ASGR1P07306 291 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 HGFP14210 728 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TFEBP19484 476 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 NTSP30990 170 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 RAB10P61026 200 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 IRF8Q02556 426 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PRKG2Q13237 762 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 PABPC1LQ4VXU2 614 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms