RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 VPS39Q96JC1 886 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 TUBGCP5Q96RT8 1024 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 CIPCQ9C0C6 399 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ATP13A3Q9H7F0 1226 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ELOVL2Q9NXB9 296 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 SLC17A7Q9P2U7 560 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 FBXO5Q9UKT4 447 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 HCN2Q9UL51 889 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 RPL26L1Q9UNX3 145 aaKnown RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ZNF106Q9H2Y7 1883 aaKnown RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 BNIP3LO60238 219 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ECI2O75521 394 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 RPP40O75818 363 aaKnown RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 CRTAMO95727 393 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 GOT2P00505 430 aaKnown RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 SRPRAP08240 638 aaKnown RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 CA4P22748 312 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 SPRP35270 261 aaPredicted RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ETV4P43268 484 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 SEC24CP53992 1094 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 GRAMD4Q6IC98 578 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 PTAR1Q7Z6K3 402 aaPredicted RBP15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 OR4K2Q8NGD2 314 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 SPOCK2Q92563 424 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 PTPRN2Q92932 1015 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 GPR22Q99680 433 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 FAM167BQ9BTA0 163 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 RHOJQ9H4E5 214 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 CCDC134Q9H6E4 229 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 MAGEE1Q9HCI5 957 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 MKS1Q9NXB0 559 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 NSMCE4AQ9NXX6 385 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 DEC1Q9P2X7 70 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 ZNF711Q9Y462 761 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 WASF2Q9Y6W5 498 aa15.74■□□□□ 0.11
NIPAL3-204ENST00000374399 HAUS5O94927 633 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 POP4O95707 220 aaKnown RBP15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 ASLP04424 464 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 CTSLP07711 333 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 PRSS56P0CW18 603 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 HNF1BP35680 557 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 KDSRQ06136 332 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 LAMB3Q13751 1172 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 THOC5Q13769 683 aaKnown RBP15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 GRM3Q14832 879 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 PPM1JQ5JR12 505 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 CMC1Q7Z7K0 106 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 LDB1Q86U70 411 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 CILP2Q8IUL8 1156 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 SUV39H2Q9H5I1 410 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 CAB39LQ9H9S4 337 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 POLR3BQ9NW08 1133 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 TXNDC16Q9P2K2 825 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 EPS15L1Q9UBC2 864 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 PPIL1Q9Y3C6 166 aa15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 USP15Q9Y4E8 981 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-204ENST00000374399 TICRRQ7Z2Z1 1910 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 A6NNZ2 444 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 S1PR4O95977 384 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 DHRS4L1P0CG22 281 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 LPOP22079 712 aaPredicted RBP15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 SERPINA4P29622 427 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 GDI1P31150 447 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 LEPRP48357 1165 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 PGGT1BP53609 377 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 TUBB8Q3ZCM7 444 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 CNSTQ6PJW8 725 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 KIAA0408Q6ZU52 694 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 LYSMD3Q7Z3D4 306 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 GALNT7Q86SF2 657 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 CPA6Q8N4T0 437 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 ZNF366Q8N895 744 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 GPR150Q8NGU9 434 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 OR6P1Q8NGX9 317 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 SGSM3Q96HU1 749 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 ZNF317Q96PQ6 595 aaPredicted RBP15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 LYSMD1Q96S90 227 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 SRPK1Q96SB4 655 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 ZDHHC6Q9H6R6 413 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 FBXO6Q9NRD1 293 aaPredicted RBP15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 SNX15Q9NRS6 342 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 PCMTD2Q9NV79 361 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 HACD3Q9P035 362 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 IL17CQ9P0M4 197 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 COL4A2P08572 1712 aa15.72■□□□□ 0.11
NIPAL3-204ENST00000374399 ANHXE9PGG2 379 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 TIMM44O43615 452 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 ZWINTO95229 277 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 UGT2B4P06133 528 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 ATP5BP06576 529 aaKnown RBP15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 IGFBP4P22692 258 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 FOXN2P32314 431 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 EPHB1P54762 984 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 PRAMEP78395 509 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 PEX6Q13608 980 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 HTR4Q13639 388 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 SPNS2Q8IVW8 549 aa15.71■□□□□ 0.11
NIPAL3-204ENST00000374399 NDUFAF2Q8N183 169 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms