RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF844Q08AG5 666 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 TMEM216Q9P0N5 145 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 FAM237BA0A1B0GVD1 139 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 BANF1O75531 89 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 NR2F1P10589 423 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ATP4AP20648 1035 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 DGKAP23743 735 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 S100GP29377 79 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 GSTT1P30711 240 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 GPR107Q5VW38 600 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 PARGQ86W56 976 aa14.36□□□□□ -0.11
TRAF1-201ENST00000373887 FAM98AQ8NCA5 519 aaKnown RBP14.36□□□□□ -0.11
TRAF1-201ENST00000373887 MCIDASD6RGH6 385 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 RPL9P32969 192 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 TBX2Q13207 712 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SMCO1Q147U7 214 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SLC45A4Q5BKX6 768 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 FAM35AQ86V20 835 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ADGRG2Q8IZP9 1017 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 TSPAN14Q8NG11 270 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 MYDGFQ969H8 173 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 GULP1Q9UBP9 304 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 C2CD2Q9Y426 696 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CYP3A7-CYP3A51PA0A087WV96 503 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 OR10H3O60404 316 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CYP3A7P24462 503 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 TKTP29401 623 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 TLX1P31314 330 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CLCNKBP51801 687 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 UBAP2LQ14157 1087 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 FIGNQ5HY92 759 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 DENND5AQ6IQ26 1287 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF655Q8N720 491 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 FAR1Q8WVX9 515 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 EMID1Q96A84 441 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 HAT1O14929 419 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SCN2BO60939 215 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 DNTTP04053 509 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 S100A6P06703 90 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CCNYL3P0C7X3 344 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SPATA31C1P0DKV0 1188 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 PRLRP16471 622 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 NELFEP18615 380 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ATP5F1P24539 256 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 GRM5P41594 1212 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SUZ12Q15022 739 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CXXC5Q7LFL8 322 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 C2orf73Q8N5S3 287 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ATP13A3Q9H7F0 1226 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 LRATO95237 230 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CCNB1P14635 433 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 IRF8Q02556 426 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 MED22Q15528 200 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF549Q6P9A3 640 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ULK2Q8IYT8 1036 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ARL10Q8N8L6 244 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ZHX1-C8orf76Q96EF9 292 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 OXCT2Q9BYC2 517 aaPredicted RBP14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ABCG4Q9H172 646 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ETNK2Q9NVF9 386 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 GMIPQ9P107 970 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 CCNE2O96020 404 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 MAGP20916 626 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 UGT2B15P54855 530 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 MTA1Q13330 715 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 FAAH2Q6GMR7 532 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 IRGCQ6NXR0 463 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 ANGPT4Q9Y264 503 aa14.35□□□□□ -0.11
TRAF1-201ENST00000373887 TFECO14948 347 aaPredicted RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 RECQL5O94762 991 aaPredicted RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 LCA5LO95447 670 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 LAG3P18627 525 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 PSMD8P48556 350 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 RPL38P63173 70 aaKnown RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 TAF10Q12962 218 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 SPATA6LQ8N4H0 392 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 ANKRD52Q8NB46 1076 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 PHF10Q8WUB8 498 aaKnown RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 HDAC7Q8WUI4 952 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 CLCC1Q96S66 551 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 GSDMCQ9BYG8 508 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 CST1P01037 141 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 ADSSP30520 456 aa14.34□□□□□ -0.11
TRAF1-201ENST00000373887 BUD31P41223 144 aaPredicted RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 CLK3P49761 638 aaKnown RBP14.34□□□□□ -0.11
TRAF1-201ENST00000373887 FBXW8Q8N3Y1 598 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms