RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 SERHLQ9NQF3 203 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 FBXO39Q8N4B4 442 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 NAT16Q8N8M0 369 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 PHF21BQ96EK2 531 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 PADI4Q9UM07 663 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 ARVCFO00192 962 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 ANPEPP15144 967 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 TSHRP16473 764 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 PSMB4P28070 264 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 NOMO3P69849 1222 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 MSLNQ13421 630 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 TAB1Q15750 504 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 PHB2Q99623 299 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 GPSM3Q9Y4H4 160 aa13.37□□□□□ -0.27
RAPGEF1-201ENST00000372189 A0A087X1B8 175 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ARHGEF33A8MVX0 844 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RPL14P50914 215 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 HK2P52789 917 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 PFKPQ01813 784 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 FSTL1Q12841 308 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 PCID2Q5JVF3 399 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF618Q5T7W0 954 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RNF148Q8N7C7 305 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM220BPB1ANY3 271 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 DNTTP04053 509 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 DGKAP23743 735 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 AIF1P55008 147 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 NR1H2P55055 460 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 PDK4Q16654 411 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 DHDDSQ86SQ9 333 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 WDR36Q8NI36 951 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ACTRT2Q8TDY3 377 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RIPOR3Q96MK2 946 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 WNT7AO00755 349 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 OPLAHO14841 1288 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 GRM6O15303 877 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 CD3EAPO15446 510 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 MT-CO1P00395 513 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 CENPAP49450 140 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 TSNQ15631 228 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 TSPAN14Q8NG11 270 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ENKURQ8TC29 256 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ART4Q93070 314 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 SNX27Q96L92 541 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF670Q9BS34 389 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 GMIPQ9P107 970 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 NCANO14594 1321 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 AREL1O15033 823 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 USP12O75317 370 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 KATNA1O75449 491 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RPL5P46777 297 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 CLCN2P51788 898 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 DRG2P55039 364 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 PLGRKTQ9HBL7 147 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 MID1IP1Q9NPA3 183 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RPS6KB2Q9UBS0 482 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 GNPTGQ9UJJ9 305 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 BMP10O95393 424 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ITGADQ13349 1161 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 MPPE1Q53F39 396 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 RNF157Q96PX1 679 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ASB8Q9H765 288 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 ATXN10Q9UBB4 475 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 AP3M1Q9Y2T2 418 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 Q9Y3F1 56 aa13.36□□□□□ -0.27
RAPGEF1-201ENST00000372189 PSMD11O00231 422 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 BTN3A1O00481 513 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF3P17036 446 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CES1P23141 567 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 HTR1BP28222 390 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC44A2Q8IWA5 706 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 HDAC2Q92769 488 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms