RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NKRFO15226 690 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SNX3O60493 162 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 EIF4BP23588 611 aaKnown RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ALDH3A2P51648 485 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PDK4Q16654 411 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 MTX3Q5HYI7 312 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 C10orf107Q8IVU9 208 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ALLCQ8N6M5 410 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 NECTIN3Q9NQS3 549 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PACSIN3Q9UKS6 424 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 A0A0G2JPF8 293 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 HNRNPCL3B7ZW38 293 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 AXIN1O15169 862 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 UGT2B17O75795 530 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TOP3BO95985 862 aaKnown RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 HNRNPCL4P0DMR1 293 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PTGR2Q8N8N7 351 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 F8VP50 259 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SUV39H1O43463 412 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 INSRRP14616 1297 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ARFIP1P53367 373 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 RGS1Q08116 209 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 MAMLD1Q13495 774 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 AFTPHQ6ULP2 937 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GALNT5Q7Z7M9 940 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 CXorf40AQ8TE69 158 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 DPF3Q92784 378 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TOR3AQ9H497 397 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GGA2Q9UJY4 613 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PPP4CP60510 307 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PMM1Q92871 262 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 BORCS5Q969J3 196 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 URADA6NGE7 173 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PPM1BO75688 479 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PFKPQ01813 784 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■■■■■ 39.2
HCFC1-202ENST00000369984 LRRC20Q8TCA0 184 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TMEM51Q9NW97 253 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TMEM5Q9Y2B1 443 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 MDM4O15151 490 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 DHFRP00374 187 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 CATP04040 527 aaKnown RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GALNT18Q6P9A2 607 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PIK3C3Q8NEB9 887 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ATP13A3Q9H7F0 1226 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 AVILO75366 819 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 TRUB2O95900 331 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 OTCP00480 354 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 DPYSQ14117 519 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CRTC3Q6UUV7 619 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 MCFD2Q8NI22 146 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF398Q8TD17 642 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 IFNGP01579 166 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 IFNA6P05013 189 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 HSD3B1P14060 373 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 GJA1P17302 382 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 AMD1P17707 334 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 ADGRG2Q8IZP9 1017 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 FCRL4Q96PJ5 515 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 DGKBQ9Y6T7 804 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.411e-8■■■■□ 21.3
HCFC1-202ENST00000369984 PQBP1O60828 265 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 TFEBP19484 476 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 NOS2P35228 1153 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CLCN5P51795 746 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 LSM12Q3MHD2 195 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 MECRQ9BV79 373 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 NOL11Q9H8H0 719 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 FBXL21Q9UKT6 434 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 FTH1P02794 183 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 EPHA3P29320 983 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 ARPC4P59998 168 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CBX3Q13185 183 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 PRR23CQ6ZRP0 262 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 TEFMQ96QE5 360 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 TCF12Q99081 682 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms