RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CFAP46Q8IYW2 2715 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
CKS1B-202ENST00000368436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.07■□□□□ 0.16
CKS1B-202ENST00000368436 PLD2O14939 933 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 NOBOXO60393 691 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 RPLP0P05388 317 aaKnown RBP16.07■□□□□ 0.16
CKS1B-202ENST00000368436 PLA2G2AP14555 144 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 PNLIPP16233 465 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 GLB1P16278 677 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 SCNN1BP51168 640 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 RENBPP51606 427 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 INHBCP55103 352 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 TYRO3Q06418 890 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 SLC10A7Q0GE19 358 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 LBRQ14739 615 aaKnown RBP16.07■□□□□ 0.16
CKS1B-202ENST00000368436 ASIC2Q16515 512 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 PNCKQ6P2M8 343 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 RAB11FIP2Q7L804 512 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF605Q86T29 641 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 TP53INP2Q8IXH6 220 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 FBXO39Q8N4B4 442 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 TMEM74Q96NL1 305 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF599Q96NL3 588 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 BPIFA3Q9BQP9 254 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 LGR4Q9BXB1 951 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 STRADBQ9C0K7 418 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
CKS1B-202ENST00000368436 SEPT3Q9UH03 358 aa16.07■□□□□ 0.16
CKS1B-202ENST00000368436 A0A1W2PQ67 120 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 DDX3XO00571 662 aaKnown RBP eCLIP16.06■□□□□ 0.165e-15■■■□□ 17.2
CKS1B-202ENST00000368436 HTRA2O43464 458 aaPredicted RBP16.06■□□□□ 0.16
CKS1B-202ENST00000368436 PEX11BO96011 259 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 CR2P20023 1033 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 UGT1A5P35504 534 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 PCK1P35558 622 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 TMCO4Q5TGY1 634 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
CKS1B-202ENST00000368436 TAF8Q7Z7C8 310 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 CCNJLQ8IV13 435 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 PELI3Q8N2H9 469 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 CBARPQ8N350 705 aaPredicted RBP16.06■□□□□ 0.16
CKS1B-202ENST00000368436 FAM46DQ8NEK8 389 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 COQ10AQ96MF6 247 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.06■□□□□ 0.16
CKS1B-202ENST00000368436 FOXP3Q9BZS1 431 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
CKS1B-202ENST00000368436 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 EPB41L5Q9HCM4 733 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 ACSL6Q9UKU0 697 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 SCINQ9Y6U3 715 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 ATMQ13315 3056 aa16.06■□□□□ 0.16
CKS1B-202ENST00000368436 COL6A6A6NMZ7 2263 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 A0A1W2PQC6 194 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 A8MX80 341 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 PDE2AO00408 941 aaPredicted RBP16.05■□□□□ 0.16
CKS1B-202ENST00000368436 SOCS5O75159 536 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 MBD3O95983 291 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 IL1R2P27930 398 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 SLC5A2P31639 672 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 ZFP36L1Q07352 338 aaKnown RBP16.05■□□□□ 0.16
CKS1B-202ENST00000368436 HLTFQ14527 1009 aaKnown RBP eCLIP16.05■□□□□ 0.16
CKS1B-202ENST00000368436 ACOX1Q15067 660 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 DPYSL2Q16555 572 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
CKS1B-202ENST00000368436 C14orf28Q4W4Y0 310 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 CCDC81Q6ZN84 652 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 SFTPA2Q8IWL1 248 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 PAF1Q8N7H5 531 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF653Q96CK0 615 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 WDR26Q9H7D7 661 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 ZWILCHQ9H900 591 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 CYP4F12Q9HCS2 524 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 MRPL47Q9HD33 250 aaKnown RBP16.05■□□□□ 0.16
CKS1B-202ENST00000368436 B4GALT6Q9UBX8 382 aa16.05■□□□□ 0.16
CKS1B-202ENST00000368436 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 H3BRJ5 948 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 EFSO43281 561 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 MAFKO60675 156 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 MYBL1P10243 752 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 AMPD1P23109 780 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 HSPA9P38646 679 aaKnown RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ANP32AP39687 249 aaKnown RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 CNGA3Q16281 694 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ANO6Q4KMQ2 910 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 BOLA3Q53S33 107 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 SPECC1LQ69YQ0 1117 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 SPRED1Q7Z699 444 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 C17orf82Q86X59 251 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 PGBD5Q8N414 524 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 Q8N9G6 341 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 CCL4L1Q8NHW4 92 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 GPBAR1Q8TDU6 330 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 TMEM159Q96B96 161 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 TRIM11Q96F44 468 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms