RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 TRIM64CA6NLI5 447 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 TRPC5OSA6NMA1 111 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 RNF103O00237 685 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 PIK3R2O00459 728 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 CCL16O15467 120 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 TOP3BO95985 862 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 SP9P0CG40 484 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 OR1D2P34982 312 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 GRM5P41594 1212 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 GRIA1P42261 906 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 HCAR3P49019 387 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 KPNA2P52292 529 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 IFRD2Q12894 506 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 ILF2Q12905 390 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 DCTN2Q13561 401 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 LRRC36Q1X8D7 754 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 DCAF4L1Q3SXM0 396 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 XKR4Q5GH76 650 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 PPP6R3Q5H9R7 873 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 PPM1LQ5SGD2 360 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 HACD2Q6Y1H2 254 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ERMP1Q7Z2K6 904 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 SNX32Q86XE0 403 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ERI1Q8IV48 349 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 C1orf210Q8IVY1 113 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 TMEM102Q8N9M5 508 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 GOLM1Q8NBJ4 401 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 PJA1Q8NG27 643 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ITFG1Q8TB96 612 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 SHKBP1Q8TBC3 707 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ASB9Q96DX5 294 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ZNF597Q96LX8 424 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 GPR22Q99680 433 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 TRIM56Q9BRZ2 755 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 CHCHD3Q9NX63 227 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
USF1-201ENST00000368019 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 CLIC5Q9NZA1 410 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 PTBP2Q9UKA9 531 aaKnown RBP11.59□□□□□ -0.55
USF1-201ENST00000368019 CDYLQ9Y232 598 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 BACE2Q9Y5Z0 518 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 AK5Q9Y6K8 562 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 R4GN57 208 aa11.59□□□□□ -0.55
USF1-201ENST00000368019 ACOT8O14734 319 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 XYLBO75191 536 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 C2P06681 752 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 FAM163BP0C2L3 166 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 FAM200BP0CF97 657 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 PSMC3P17980 439 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MATKP42679 507 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 ID4P47928 161 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 CDK9P50750 372 aaKnown RBP11.58□□□□□ -0.56
USF1-201ENST00000368019 CLCNKBP51801 687 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 THOP1P52888 689 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 ZNF33AQ06730 810 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MPP3Q13368 585 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MYBPC3Q14896 1274 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 UPP1Q16831 310 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 UGP2Q16851 508 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MYLK3Q32MK0 819 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 LSM12Q3MHD2 195 aaKnown RBP11.58□□□□□ -0.56
USF1-201ENST00000368019 SPATS1Q496A3 300 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 KCTD11Q693B1 232 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 FSTL4Q6MZW2 842 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 POTEHQ6S545 545 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 ALKAL1Q6UXT8 129 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MTSS1LQ765P7 747 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 METTL25Q8N6Q8 603 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 C3orf58Q8NDZ4 430 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 MAPK15Q8TD08 544 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 STYXQ8WUJ0 223 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 NTAN1Q96AB6 310 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 NMD3Q96D46 503 aaKnown RBP11.58□□□□□ -0.56
USF1-201ENST00000368019 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 SHDQ96IW2 340 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 RHOJQ9H4E5 214 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 WDR41Q9HAD4 459 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 HCFC1R1Q9NWW0 138 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 ZNHIT2Q9UHR6 403 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 IPO11Q9UI26 975 aaKnown RBP11.58□□□□□ -0.56
USF1-201ENST00000368019 TRHDEQ9UKU6 1024 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
USF1-201ENST00000368019 LOC100653049A0A140TA62 436 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 SMIM28A0A1B0GU29 152 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ZCWPW2A0A1B0GU75 182 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 KANSL1LA0AUZ9 987 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms