RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ERVK-5Q9HDB9 667 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DNPEPQ9ULA0 475 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 BTBD19C9JJ37 291 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ACADLP28330 430 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 CSHL1Q14406 222 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 BICRALQ6AI39 1079 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM86B1E9PN63 330 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 PRG2P13727 222 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 THPOP40225 353 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 PIK3CGP48736 1102 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MFSD5Q6N075 450 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZNF621Q6ZSS3 439 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MAGEC1O60732 1142 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ANXA9O76027 345 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 THRBP10828 461 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SGCGQ13326 291 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 CADM2Q8N3J6 435 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPERTQ8NA61 448 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 LRRN4Q8WUT4 740 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZNF486Q96H40 463 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 COQ10BQ9H8M1 238 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 AAASQ9NRG9 546 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 EPHB6O15197 1021 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 CREB1P16220 341 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MTAPQ13126 283 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DLG2Q15700 870 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 C10orf107Q8IVU9 208 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 PCDH9Q9HC56 1237 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 EFCAB9A8MZ26 197 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 PHKG2P15735 406 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ACADSBP45954 432 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 AP3M2P53677 418 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZMYND11Q15326 602 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 AKAP7Q9P0M2 348 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FUOMA2VDF0 154 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 C5orf60A6NFR6 353 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 EYA4O95677 639 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 IL7P13232 177 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 WSCD2Q2TBF2 565 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ADHFE1Q8IWW8 467 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DPF3Q92784 378 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FBXL20Q96IG2 436 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 REEP1Q9H902 201 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 DSELQ8IZU8 1212 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPATA6LQ8N4H0 392 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 MARK1Q9P0L2 795 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM50BQ9Y247 325 aa11.09□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZNF335Q9H4Z2 1342 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ABCC3O15438 1527 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 APOC3P02656 99 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 CYP3A5P20815 502 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 DUPD1Q68J44 220 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 PRAMEF1O95521 474 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 PRKAG1P54619 331 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 RAB2AP61019 212 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 RAPSNQ13702 412 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.08□□□□□ -0.643e-18■■■■■ 55.1
CDC42BPA-205ENST00000366769 CCNYL2Q5T2Q4 361 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 TIGD3Q6B0B8 471 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 SPPL2CQ8IUH8 684 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 GALNT11Q8NCW6 608 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 UBP1Q9NZI7 540 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ARHGAP28Q9P2N2 729 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 TMEM5Q9Y2B1 443 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 E9PAM4 449 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 IL18RAPO95256 599 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 GNAO1P09471 354 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ODC1P11926 461 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 MPSTP25325 297 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 HNRNPFP52597 415 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 PRR5LQ6MZQ0 368 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 TTLL8A6PVC2 850 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 STX16-NPEPL1H3BU86 382 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 STX16O14662 325 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ACOX1Q15067 660 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 TLR1Q15399 786 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 GALNTL5Q7Z4T8 443 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 SLC15A4Q8N697 577 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 SLC37A3Q8NCC5 494 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 C10orf82Q8WW14 230 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 AHSPQ9NZD4 102 aa11.08□□□□□ -0.64
CDC42BPA-205ENST00000366769 ZMYM5Q9UJ78 669 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms