RNA–Protein interactions for RNA: ENST00000366662.8

TTC13-202, Transcript of tetratricopeptide repeat domain 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC13, Length 3,112 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-202ENST00000366662 THOP1P52888 689 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 FRG1Q14331 258 aaKnown RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 MSANTD2Q6P1R3 559 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 ACAD11Q709F0 780 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 FUBP3Q96I24 572 aaKnown RBP eCLIP17.14■□□□□ 0.33
TTC13-202ENST00000366662 CCDC167Q9P0B6 97 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 GMPR2Q9P2T1 348 aaKnown RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 LRCH1Q9Y2L9 728 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 SPO11Q9Y5K1 396 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 ARHGEF37A1IGU5 675 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 CBX4O00257 560 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 SLC2A3P11169 496 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 RAG1P15918 1043 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 XRCC1P18887 633 aaPredicted RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 PEX2P28328 305 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 NDST2P52849 883 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 HTRA3P83110 453 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 SULT2A1Q06520 285 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 TECRLQ5HYJ1 363 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 SDCCAG8Q86SQ7 713 aaPredicted RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 RBM12BQ8IXT5 1001 aaKnown RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 KLHDC8BQ8IXV7 354 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 AUTS2Q8WXX7 1259 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 NSUN5Q96P11 429 aaKnown RBP17.14■□□□□ 0.33
TTC13-202ENST00000366662 GBP5Q96PP8 586 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 SIKE1Q9BRV8 207 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 S100A14Q9HCY8 104 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
TTC13-202ENST00000366662 KLKB1P03952 638 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 GALTP07902 379 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 TPP2P29144 1249 aaPredicted RBP17.13■□□□□ 0.33
TTC13-202ENST00000366662 CRABP2P29373 138 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 SOX11P35716 441 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 MAGEA8P43361 318 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 MYBPC3Q14896 1274 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 FAM83EQ2M2I3 478 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 EFHBQ8N7U6 833 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 DCBLD1Q8N8Z6 715 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 ACTRT2Q8TDY3 377 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 MRPL57Q9BQC6 102 aaKnown RBP17.13■□□□□ 0.33
TTC13-202ENST00000366662 STN1Q9H668 368 aaKnown RBP17.13■□□□□ 0.33
TTC13-202ENST00000366662 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 SORCS3Q9UPU3 1222 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 A0A1B0GTL3 188 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 AP3B1O00203 1094 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 SPATA31D3P0C874 917 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 MRPS22P82650 360 aaKnown RBP17.13■□□□□ 0.33
TTC13-202ENST00000366662 MS4A2Q01362 244 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 POU4F1Q01851 419 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 BTKQ06187 659 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
TTC13-202ENST00000366662 SPATA31D4Q6ZUB0 917 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 KCNA7Q96RP8 456 aa17.13■□□□□ 0.33
TTC13-202ENST00000366662 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 SDHDO14521 159 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 CAPN15O75808 1086 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
TTC13-202ENST00000366662 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 PGM2L1Q6PCE3 622 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 FBXW8Q8N3Y1 598 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 OR6K2Q8NGY2 324 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 PREBQ9HCU5 417 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 F8W8V4 182 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 UBXN8O00124 270 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 APOA4P06727 396 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 LTA4HP09960 611 aaKnown RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 ATP5F1P24539 256 aaPredicted RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 FMO4P31512 558 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 ECT2LQ008S8 904 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 GEN1Q17RS7 908 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 PITRM1Q5JRX3 1037 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 C1QTNF12Q5T7M4 302 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 ZNF184Q99676 751 aaPredicted RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 TMEM165Q9HC07 324 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 ANGPTL2Q9UKU9 493 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 C2orf78A6NCI8 922 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 F5H5T6 163 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 H3BMM5 538 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 DNAJB2P25686 324 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 LEPRP48357 1165 aaKnown RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 GPR17Q13304 367 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 MRPL58Q14197 206 aaKnown RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
TTC13-202ENST00000366662 CUZD1Q86UP6 607 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 TRIM8Q9BZR9 551 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
TTC13-202ENST00000366662 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 ATP13A1Q9HD20 1204 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 GALNT8Q9NY28 637 aa17.12■□□□□ 0.33
TTC13-202ENST00000366662 CASP8AP2Q9UKL3 1982 aa17.11■□□□□ 0.33
TTC13-202ENST00000366662 RGSL1A5PLK6 1076 aa17.11■□□□□ 0.33
TTC13-202ENST00000366662 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
TTC13-202ENST00000366662 SNAP91O60641 907 aa17.11■□□□□ 0.33
TTC13-202ENST00000366662 IPO13O94829 963 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms