RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MCCC1Q96RQ3 725 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 AK5Q9Y6K8 562 aa13.71□□□□□ -0.21
TNFRSF1A-202ENST00000366159 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CPED1A4D0V7 1026 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 A8MX80 341 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CASC3O15234 703 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 BRINP1O60477 761 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DXOO77932 396 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HEXIM1O94992 359 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RASGRP1O95267 797 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PGLSO95336 258 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ALPIP09923 528 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GARSP41250 739 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MMP13P45452 471 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KRT81Q14533 505 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDK2Q15119 407 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ELOCQ15369 112 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CNGA3Q16281 694 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HADHQ16836 314 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ISXQ2M1V0 245 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 OGFOD3Q6PK18 319 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDZD3Q86UT5 571 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HID1Q8IV36 788 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 VSTM4Q8IW00 320 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 BBS5Q8N3I7 341 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PQLC3Q8N755 202 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 OR56A4Q8NGH8 313 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TPCN2Q8NHX9 752 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 OR1E3Q8WZA6 343 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 FGF11Q92914 225 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GLMNQ92990 594 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TSGA13Q96PP4 275 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ZNF670Q9BS34 389 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 LGR4Q9BXB1 951 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ABCG4Q9H172 646 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 FGF22Q9HCT0 170 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CTTNBP2NLQ9P2B4 639 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PADI4Q9UM07 663 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RP1P56715 2156 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CACNA1GO43497 2377 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SHROOM3Q8TF72 1996 aa13.7□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NPIPB15A6NHN6 443 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PSMD11O00231 422 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NTN3O00634 580 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MATN3O15232 486 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CSO75390 466 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TCEA3O75764 348 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CPP00450 1065 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TPM3P06753 285 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDHA1P08559 390 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HOXB3P14651 431 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CCNCP24863 283 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 VIPR1P32241 457 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MAN1A1P33908 653 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 LSSP48449 732 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RPIAP49247 311 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDX1P52945 283 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SLC10A2Q12908 348 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TRIM14Q14142 442 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PTPRRQ15256 657 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TBC1D25Q3MII6 688 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 IGF2-ASQ6U949 168 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HSD11B1LQ7Z5J1 315 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GRAMD1AQ96CP6 724 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HIC2Q96JB3 615 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CHP1Q99653 195 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TEX101Q9BY14 249 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ENTPD2Q9Y5L3 495 aa13.69□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CACNB4O00305 520 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 USP12O75317 370 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MTA2O94776 668 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TNFP01375 233 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 FUCA1P04066 466 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KRT7P08729 469 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CTSEP14091 401 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ITPKBP27987 946 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TEAD1P28347 426 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ACOX1Q15067 660 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ARMC12Q5T9G4 340 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RD3Q7Z3Z2 195 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GKN2Q86XP6 184 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KYQ8NBH2 561 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KCTD6Q8NC69 237 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GPR156Q8NFN8 814 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms