RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ARFGAP1Q8N6T3 406 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 SPPL2AQ8TCT8 520 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 MAGED4Q96JG8 741 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 ELOVL6Q9H5J4 265 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CATSPERZQ9NTU4 200 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 PIGVQ9NUD9 493 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 SPASTQ9UBP0 616 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 LEF1Q9UJU2 399 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TSPAN1O60635 241 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 AHSGP02765 367 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 NTRK1P04629 796 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 ABCB1P08183 1280 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 PABPC4LP0CB38 370 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 IDH2P48735 452 aaKnown RBP13.94□□□□□ -0.18
COL6A1-201ENST00000361866 GNA12Q03113 381 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 TRAF7Q6Q0C0 670 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CLHC1Q8NHS4 586 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 ZFP28Q8NHY6 868 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 UGT2B28Q9BY64 529 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 GBA3Q9H227 469 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
COL6A1-201ENST00000361866 KLHL33A6NCF5 533 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 OR51F1A6NGY5 319 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 NADKO95544 446 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 JAK1P23458 1154 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 CEACAM7Q14002 265 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 MYLK3Q32MK0 819 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 GLYATQ6IB77 296 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 KCTD8Q6ZWB6 473 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 MAPK15Q8TD08 544 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 PNPLA8Q9NP80 782 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 TMA7Q9Y2S6 64 aaKnown RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 MYBPHLA2RUH7 354 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 PAGE1O75459 146 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SLC1A2P43004 574 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 BRCC3P46736 316 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF132P52740 706 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 OXCT1P55809 520 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 RPL38P63173 70 aaKnown RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 LIPEQ05469 1076 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF177Q13360 481 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SIM2Q14190 667 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 MAPKAPK3Q16644 382 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 NECAB2Q7Z6G3 386 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 PNPLA1Q8N8W4 532 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 TWIST2Q8WVJ9 160 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 A0A1W2PPW3 197 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF197O14709 1029 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 RNASEH2AO75792 299 aaKnown RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SEC24AO95486 1093 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 ZBTB48P10074 688 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 DBTP11182 482 aaKnown RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 RPS9P46781 194 aaKnown RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SLC39A12Q504Y0 691 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 GALNT5Q7Z7M9 940 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 HPS1Q92902 700 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SOX17Q9H6I2 414 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 TLE6Q9H808 572 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SMPD3Q9NY59 655 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-201ENST00000361866 SLC2A6Q9UGQ3 507 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
COL6A1-201ENST00000361866 UBXN8O00124 270 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 MATN2O00339 956 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SOAT1P35610 550 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 ST13P50502 369 aaKnown RBP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CYP4F2P78329 520 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 MAP3K10Q02779 954 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CYP4F3Q08477 520 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 B3GNT9Q6UX72 402 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF778Q96MU6 729 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 ALG2Q9H553 416 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CNTN6Q9UQ52 1028 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 STYXL1Q9Y6J8 313 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 TTC24A2A3L6 582 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 PIP5K1BO14986 540 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 PRIM2P49643 509 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SEPHS1P49903 392 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 IL2P60568 153 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 HPCAP84074 193 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 PPP1R3AQ16821 1122 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF621Q6ZSS3 439 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 TMEM110Q86TL2 294 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 POC5Q8NA72 575 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CEP44Q9C0F1 390 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CNGB3Q9NQW8 809 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 GIMAP4Q9NUV9 329 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms