RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 SIX3O95343 332 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 CHRNGP07510 517 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 HNRNPA1P09651 372 aaKnown RBP eCLIP2.87□□□□□ -1.95
LTN1-201ENST00000361371 CSRP3P50461 194 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 KPNA1P52294 538 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 UBE3AQ05086 875 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 GABPB1Q06547 395 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 CBLBQ13191 982 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 PEX6Q13608 980 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 ZXDCQ2QGD7 858 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 KLHL38Q2WGJ6 581 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 SPDYCQ5MJ68 293 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 TIGD7Q6NT04 549 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 ANKRD54Q6NXT1 300 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 OTOAQ7RTW8 1153 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 HSD11B1LQ7Z5J1 315 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FSTL5Q8N475 847 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 PAF1Q8N7H5 531 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 MAPK15Q8TD08 544 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 NUDT8Q8WV74 236 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FEM1CQ96JP0 617 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 RBBP8Q99708 897 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 MYOCQ99972 504 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 EBF4Q9BQW3 602 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 CYP4F12Q9HCS2 524 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 G3BP2Q9UN86 482 aaKnown RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 FAM50BQ9Y247 325 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 TNRC18O15417 2968 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 SCN5AQ14524 2016 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FAM47DPA6NHR8 397 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 CDC7O00311 574 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 MTSS1O43312 755 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 NARSO43776 548 aaKnown RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 ZBTB14O43829 449 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 USP1O94782 785 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 GDI1P31150 447 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FMO4P31512 558 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 ZNF135P52742 658 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 EPHB1P54762 984 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 CDK16Q00536 496 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 ZSCAN26Q16670 478 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FAM151BQ6UXP7 276 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 SERPINA13PQ6UXR4 307 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 ZNF771Q7L3S4 317 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 CLEC14AQ86T13 490 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 STK40Q8N2I9 435 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 ELMOD1Q8N336 334 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 IFT43Q96FT9 208 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 TTC25Q96NG3 672 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 NUDCD1Q96RS6 583 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FAM129BQ96TA1 746 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 GATA5Q9BWX5 397 aaPredicted RBP2.87□□□□□ -1.95
LTN1-201ENST00000361371 ECT2Q9H8V3 914 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 PNPOQ9NVS9 261 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 MYH11P35749 1972 aa2.87□□□□□ -1.95
LTN1-201ENST00000361371 FAM95CA0A1B0GW59 222 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 GMNCA6NCL1 334 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ZNF140P52738 457 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 B4GALNT1Q00973 533 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 MYLK3Q32MK0 819 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ARSIQ5FYB1 569 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 EGFLAMQ63HQ2 1017 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ALG1LQ6GMV1 187 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 PARS2Q7L3T8 475 aaKnown RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 LRRC49Q8IUZ0 686 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 OTUD6BQ8N6M0 293 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 KLK6Q92876 244 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 EXT2Q93063 718 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 PTERQ96BW5 349 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 PLEKHG4BQ96PX9 1271 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ABCF3Q9NUQ8 709 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 KIAA1522Q9P206 1035 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 XPR1Q9UBH6 696 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 MSRAQ9UJ68 235 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 CDH7Q9ULB5 785 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 COL6A3P12111 3177 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 MYH9P35579 1960 aaKnown RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 C1orf232A0A0U1RR37 186 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 UBA6A0AVT1 1052 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 MROH6A6NGR9 719 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 TARM1B6A8C7 271 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 COPEO14579 308 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 HTRA2O43464 458 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 DLX3O60479 287 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 KITP10721 976 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 FGF3P11487 239 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 SEC13P55735 322 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ECT2LQ008S8 904 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ITGA9Q13797 1035 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ZNF234Q14588 700 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 KIAA0930Q6ICG6 404 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 PAQR3Q6TCH7 311 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 CYS1Q717R9 158 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 PHTF2Q8N3S3 785 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 HEXDCQ8WVB3 486 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 ZNF75CPQ92670 426 aaPredicted RBP2.86□□□□□ -1.95
LTN1-201ENST00000361371 DLG3Q92796 817 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 CHMP6Q96FZ7 201 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 CEP295NLQ96MC4 621 aa2.86□□□□□ -1.95
LTN1-201ENST00000361371 C2orf49Q9BVC5 232 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms