RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 C9orf172C9J069 976 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 TNFRSF10CO14798 259 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 ELFN1P0C7U0 828 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 KELP23276 732 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 CSNK1DP48730 415 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 PAPOLAP51003 745 aaKnown RBP21.19■□□□□ 0.98
CD47-202ENST00000361309 NDST2P52849 883 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 KRT31Q15323 416 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 ZSCAN1Q8NBB4 408 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 CNPY3Q9BT09 278 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 LGR4Q9BXB1 951 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 SLC39A8Q9C0K1 460 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 GPATCH2LQ9NWQ4 482 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 PCDHB11Q9Y5F2 797 aa21.19■□□□□ 0.98
CD47-202ENST00000361309 NUDT21O43809 227 aaKnown RBP21.18■□□□□ 0.98
CD47-202ENST00000361309 PALMO75781 387 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 HOXC4P09017 264 aaPredicted RBP21.18■□□□□ 0.98
CD47-202ENST00000361309 GM2AP17900 193 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 ITGB6P18564 788 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 WT1P19544 449 aaPredicted RBP21.18■□□□□ 0.98
CD47-202ENST00000361309 TRIM23P36406 574 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 CYP4F2P78329 520 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 B4GALNT1Q00973 533 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 SYCP1Q15431 976 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 TBR1Q16650 682 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 FKBP15Q5T1M5 1219 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 DTX1Q86Y01 620 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 PELI3Q8N2H9 469 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 PAF1Q8N7H5 531 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 ECHDC3Q96DC8 303 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 DONSONQ9NYP3 566 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 SIK3Q9Y2K2 1263 aa21.18■□□□□ 0.98
CD47-202ENST00000361309 A0A1W2PQC6 194 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 ARHGAP42A6NI28 874 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 A8MX80 341 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 TERTO14746 1132 aaKnown RBP21.17■□□□□ 0.98
CD47-202ENST00000361309 TEX33O43247 280 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 B4GAT1O43505 415 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 HTR7P34969 479 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 BCL2L1Q07817 233 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 C16orf72Q14CZ0 275 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 MAP9Q49MG5 647 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 CT47A1Q5JQC4 288 aaPredicted RBP21.17■□□□□ 0.98
CD47-202ENST00000361309 PPP1R15BQ5SWA1 713 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 CDKAL1Q5VV42 579 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 AFMIDQ63HM1 303 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 PNCKQ6P2M8 343 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 DPPA4Q7L190 304 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 PIM3Q86V86 326 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 ENOX1Q8TC92 643 aaKnown RBP21.17■□□□□ 0.98
CD47-202ENST00000361309 KIAA1524Q8TCG1 905 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 CINPQ9BW66 212 aaPredicted RBP21.17■□□□□ 0.98
CD47-202ENST00000361309 NUP62CLQ9H1M0 184 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 WDR26Q9H7D7 661 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 RDH14Q9HBH5 336 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 FLNCQ14315 2725 aa21.17■□□□□ 0.98
CD47-202ENST00000361309 PRSS38A1L453 326 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 TPM2P07951 284 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 MAZP56270 477 aaKnown RBP21.16■□□□□ 0.98
CD47-202ENST00000361309 OR1D5P58170 312 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 POLR2LP62875 67 aaKnown RBP21.16■□□□□ 0.98
CD47-202ENST00000361309 OGDHQ02218 1023 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 ACOX1Q15067 660 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 AMZ1Q400G9 498 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 DCUN1D2Q6PH85 259 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 ATG14Q6ZNE5 492 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 HTR3CQ8WXA8 447 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 SUDS3Q9H7L9 328 aaPredicted RBP21.16■□□□□ 0.98
CD47-202ENST00000361309 SPATS2LQ9NUQ6 558 aaKnown RBP21.16■□□□□ 0.98
CD47-202ENST00000361309 AP4E1Q9UPM8 1137 aa21.16■□□□□ 0.98
CD47-202ENST00000361309 DOPEY2Q9Y3R5 2298 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 EEF2KO00418 725 aaKnown RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 SUV39H1O43463 412 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 CPNE6O95741 557 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 SFTPCP11686 197 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 CCL4P13236 92 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 CD82P27701 267 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 CA9Q16790 459 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 TSR1Q2NL82 804 aaKnown RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 GPBAR1Q8TDU6 330 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 JPH3Q8WXH2 748 aaPredicted RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 NSMCE3Q96MG7 304 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 PCMTD1Q96MG8 357 aaPredicted RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 AGPAT1Q99943 283 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 SEMA3CQ99985 751 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 DHX35Q9H5Z1 703 aaKnown RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 CARS2Q9HA77 564 aaKnown RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 SP110Q9HB58 689 aa21.15■□□□□ 0.98
CD47-202ENST00000361309 AKAP7Q9P0M2 348 aaPredicted RBP21.15■□□□□ 0.98
CD47-202ENST00000361309 RHPN2P1A8MT19 583 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 PDE2AO00408 941 aaPredicted RBP21.14■□□□□ 0.97
CD47-202ENST00000361309 TRAFD1O14545 582 aaPredicted RBP21.14■□□□□ 0.97
CD47-202ENST00000361309 CCNB1P14635 433 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 ALDH4A1P30038 563 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 SCNN1BP51168 640 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 NSUN2Q08J23 767 aaKnown RBP eCLIP21.14■□□□□ 0.97
CD47-202ENST00000361309 TMEM164Q5U3C3 297 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 ZNF574Q6ZN55 896 aaPredicted RBP21.14■□□□□ 0.97
CD47-202ENST00000361309 ARHGAP36Q6ZRI8 547 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 C17orf82Q86X59 251 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms