RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.54□□□□□ -0.24
CCDC197-201ENST00000359253 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 TLK1Q9UKI8 766 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 PHTF1Q9UMS5 762 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 PPIL1Q9Y3C6 166 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 WNT6Q9Y6F9 365 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 C2CD4DB7Z1M9 353 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ANHXE9PGG2 379 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 GOLGA8RI6L899 631 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 TPP1O14773 563 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 KLF11O14901 512 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 CYP17A1P05093 508 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 APOA4P06727 396 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 VIMP08670 466 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 DRD4P21917 467 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 PPARGP37231 505 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 DGKGP49619 791 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 LRRC14Q15048 493 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 GKAP1Q5VSY0 366 aaPredicted RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 AFTPHQ6ULP2 937 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 LPCAT1Q8NF37 534 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 OR6P1Q8NGX9 317 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 OR4L1Q8NH43 312 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF473Q8WTR7 871 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 CDKN2AIPNLQ96HQ2 116 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 TSNARE1Q96NA8 513 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 LYSMD1Q96S90 227 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 PLCD4Q9BRC7 762 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 SNX15Q9NRS6 342 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
CCDC197-201ENST00000359253 SLC2A6Q9UGQ3 507 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 CDH22Q9UJ99 828 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
CCDC197-201ENST00000359253 A0A0C4DFX4 3053 aa13.52□□□□□ -0.24
CCDC197-201ENST00000359253 HEPACAM2A8MVW5 462 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 STX7O15400 261 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 CD3EAPO15446 510 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ZNF821O75541 412 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 GJB3O75712 270 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 IL1BP01584 269 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 PDHA1P08559 390 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 CISD3P0C7P0 127 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 HMGCLP35914 325 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SLC26A3P40879 764 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SLC1A2P43004 574 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 CSRP3P50461 194 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SEC24CP53992 1094 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SLC12A2P55011 1212 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 FCHO2Q0JRZ9 810 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 PDE1CQ14123 709 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 DLG2Q15700 870 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ZSCAN26Q16670 478 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 DGKKQ5KSL6 1271 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ATXN7L2Q5T6C5 722 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 RNF187Q5TA31 235 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ATG16L1Q676U5 607 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ASTLQ6HA08 431 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 MICALCLQ6ZW33 695 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 CPA6Q8N4T0 437 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 PIH1D2Q8WWB5 315 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SREK1Q8WXA9 508 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 NSMCE3Q96MG7 304 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 FAM111AQ96PZ2 611 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 MYADMQ96S97 322 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 KLF6Q99612 283 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 OSBPL1AQ9BXW6 950 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SLC13A1Q9BZW2 595 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 PCMTD2Q9NV79 361 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 IL1RAPL1Q9NZN1 696 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 HECAQ9UBI9 543 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 EVLQ9UI08 416 aaPredicted RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 MTO1Q9Y2Z2 717 aaKnown RBP13.52□□□□□ -0.25
CCDC197-201ENST00000359253 PKP3Q9Y446 797 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 ARL5AQ9Y689 179 aa13.52□□□□□ -0.25
CCDC197-201ENST00000359253 A0A087X1B8 175 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 A0A096LPK6 155 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 A0A0J9YYE9 177 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms