RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PPP4CP60510 307 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ARSJQ5FYB0 599 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 VWA5B1Q5TIE3 1220 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ERAP2Q6P179 960 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 XKRXQ6PP77 449 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TEX47Q8TBZ9 253 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 LRTOMTQ8WZ04 291 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 MED11Q9P086 117 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 VPS4AQ9UN37 437 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 FAM172BPA6NC97 362 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ZNF7P17097 686 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 CCNCP24863 283 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PDIA6Q15084 440 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CPSF7Q8N684 471 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 UBR7Q8N806 425 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TMIEQ8NEW7 156 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 SEPT5Q99719 369 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 DHRS7Q9Y394 339 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 MROH1Q8NDA8 1641 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PABPC4LP0CB38 370 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 EPB42P16452 691 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC7A1P30825 629 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ALDH9A1P49189 494 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 CDH4P55283 916 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 MOGQ16653 247 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SYCE2Q6PIF2 218 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ZNF34Q8IZ26 560 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 DCP1BQ8IZD4 617 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 CLYBLQ8N0X4 340 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 NKAPQ8N5F7 415 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 PACRGLQ8N7B6 248 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 OR52E6Q96RD3 313 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TMEM94Q12767 1356 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 JCADQ9P266 1359 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ULK1O75385 1050 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 RLN1P04808 185 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 VBP1P61758 197 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 HYIQ5T013 277 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SULT1C3Q6IMI6 304 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 GALNT5Q7Z7M9 940 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SPATA5L1Q9BVQ7 753 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 OR2B2Q9GZK3 357 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 KAT8Q9H7Z6 458 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 MTRRQ9UBK8 725 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC7A8Q9UHI5 535 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PPP2R3BQ9Y5P8 575 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ADGRB1O14514 1584 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 MSL3P1P0C860 447 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 AZGP1P25311 298 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 FMO1Q01740 532 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 E2F2Q14209 437 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PHF13Q86YI8 300 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 TRNT1Q96Q11 434 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 CCSER2Q9H7U1 834 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 DDX43Q9NXZ2 648 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 XPR1Q9UBH6 696 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ILVBLA1L0T0 632 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TADA2AO75478 443 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC6A2P23975 617 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 YWHAQP27348 245 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ST8SIA6P61647 398 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 DLG1Q12959 904 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PLEKHO2Q8TD55 490 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ASB9Q96DX5 294 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC4A9Q96Q91 983 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 RHOJQ9H4E5 214 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PTBP2Q9UKA9 531 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 PRRC2BQ5JSZ5 2229 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 FAM25EA8MYX2 175 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SNAPC5O75971 98 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 TFEBP19484 476 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SEZ6Q53EL9 994 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 CUZD1Q86UP6 607 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PTGR2Q8N8N7 351 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 FAM126AQ9BYI3 521 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 COQ10BQ9H8M1 238 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ZFP14Q9HCL3 533 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PRDM8Q9NQV8 689 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PPM1HQ9ULR3 514 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 FAM50BQ9Y247 325 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 FGF10O15520 208 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 LINC00032P0C843 101 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 OXCT1P55809 520 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SMCO1Q147U7 214 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 RALGPS1Q5JS13 557 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 REP15Q6BDI9 236 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC9A9Q8IVB4 645 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 CENPSQ8N2Z9 138 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 LPCAT1Q8NF37 534 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 SYT15Q9BQS2 421 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 KCNN2Q9H2S1 579 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 PARP4Q9UKK3 1724 aaKnown RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 ARPC4-TTLL3A0A0A6YYG9 625 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 ZNF99A8MXY4 864 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 PRMT5O14744 637 aaPredicted RBP8.78□□□□□ -1
COL6A6-201ENST00000358511 SLC30A4O14863 429 aa8.78□□□□□ -1
COL6A6-201ENST00000358511 AP2A2O94973 939 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms