RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TIMM13Q9Y5L4 95 aaPredicted RBP8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 TRPC5OSA6NMA1 111 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SOCS2O14508 198 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SDHDO14521 159 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 HUS1O60921 280 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 RSL1D1O76021 490 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SUPT7LO94864 414 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 BMP10O95393 424 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 LGALS2P05162 132 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 MSL3P1P0C860 447 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 HOXD10P28358 340 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 LRPAP1P30533 357 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 IFNA8P32881 189 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 KRT6CP48668 564 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CDH13P55290 713 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TAS2R39P59534 338 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 RAB10P61026 200 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CDH17Q12864 832 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 OXA1LQ15070 435 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 FGD3Q5JSP0 725 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TAS2R42Q7RTR8 314 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 DHFR2Q86XF0 187 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CHERPQ8IWX8 916 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CBR4Q8N4T8 237 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CNTD1Q8N815 330 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRPM4Q8TD43 1214 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 HEXDCQ8WVB3 486 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PBXIP1Q96AQ6 731 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPR22Q99680 433 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZBED2Q9BTP6 218 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 C11orf84Q9BUA3 381 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 OSBPL11Q9BXB4 747 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TDRD1Q9BXT4 1180 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PIF1Q9H611 641 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TXNRD2Q9NNW7 524 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 FKBP14Q9NWM8 211 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TBC1D14Q9P2M4 693 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD12Q6UB98 2062 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 YJEFN3A6XGL0 299 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLCO1B7G3V0H7 640 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 NR5A2O00482 541 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCL22O00626 93 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PGK1P00558 417 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 YBX3P16989 372 aaKnown RBP eCLIP8.27□□□□□ -1.092e-10■■□□□ 11.7
CDC42SE1-201ENST00000357235 KCNA5P22460 613 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 NOS2P35228 1153 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 ADRA1BP35368 520 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAGEA12P43365 314 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 RHDQ02161 417 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SELENBP1Q13228 472 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CAPRIN1Q14444 709 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 NOMO2Q5JPE7 1267 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TBCELQ5QJ74 424 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 C9orf57Q5W0N0 161 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 LDB1Q86U70 411 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SPPL2CQ8IUH8 684 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TERB1Q8NA31 727 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 HM13Q8TCT9 377 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 STYXQ8WUJ0 223 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 OSCP1Q8WVF1 389 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 WNT8BQ93098 351 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC45A3Q96JT2 553 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 FSD1LQ9BXM9 530 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 MROQ9BYG7 248 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 ULBP1Q9BZM6 244 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SOX17Q9H6I2 414 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 RPF2Q9H7B2 306 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CXorf21Q9HAI6 301 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 MOV10Q9HCE1 1003 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 TNFRSF12AQ9NP84 129 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CASS4Q9NQ75 786 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PNPLA3Q9NST1 481 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 PCDHGA11Q9Y5H2 935 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CPQQ9Y646 472 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC30A1Q9Y6M5 507 aa8.27□□□□□ -1.09
CDC42SE1-201ENST00000357235 CITO14578 2027 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 MGAMO43451 1857 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 BPTFQ12830 3046 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZSCAN5BA6NJL1 495 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 H3BMQ9 156 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLOCKO15516 846 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 HTRA2O43464 458 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 NOL3O60936 208 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SRP72O76094 671 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC4A1P02730 911 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ABCB1P08183 1280 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ALOX5P09917 674 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 DDX5P17844 614 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CYP2B6P20813 491 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CD247P20963 164 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 EEF1B2P24534 225 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 YAP1P46937 504 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLK3P49761 638 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms