RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 IGLV3-27P01718 113 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 PABPC4LP0CB38 370 aaKnown RBP15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 COL6A1P12109 1028 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 CD1EP15812 388 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 KCNA5P22460 613 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 DPP6P42658 865 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 MAXP61244 160 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 HERVK_113P63132 956 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 ALFQ53S48 1182 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 RASIP1Q5U651 963 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 CCSAPQ6IQ19 270 aaPredicted RBP15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 ZNF354CQ86Y25 554 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 BBS5Q8N3I7 341 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 BRSK1Q8TDC3 778 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 USP13Q92995 863 aaPredicted RBP15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 TMA16Q96EY4 203 aaKnown RBP15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 MARK4Q96L34 752 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 KLHL5Q96PQ7 755 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 ERVK-6Q9BXR3 956 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 CACNA2D2Q9NY47 1150 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 PLK2Q9NYY3 685 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 ADA2Q9NZK5 511 aa15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
TNFSF13-202ENST00000349228 CAPN8A6NHC0 703 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 TXNDC9O14530 226 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 RPP40O75818 363 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 C8BP07358 591 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 CDKN2DP55273 166 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 STX1BP61266 288 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SREBF2Q12772 1141 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 PDAP1Q13442 181 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 AGKQ53H12 422 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 RGMBQ6NW40 437 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 GK5Q6ZS86 529 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 ANKRD49Q8WVL7 239 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 FBXO32Q969P5 355 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 ROPN1LQ96C74 230 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SPATA17Q96L03 361 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 FAM193BQ96PV7 902 aaPredicted RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 GCNAQ96QF7 691 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 UNKQ9C0B0 810 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SUDS3Q9H7L9 328 aaPredicted RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SPAG4Q9NPE6 437 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 MARCH2Q9P0N8 246 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 F8W810 466 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 CD3EAPO15446 510 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 DNAJA2O60884 412 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 STAMBPO95630 424 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 OR1G1P47890 313 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 C1QTNF8P60827 252 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 CRHR2Q13324 411 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SAMD4BQ5PRF9 694 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 REP15Q6BDI9 236 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 ALG1LQ6GMV1 187 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 LARP4Q71RC2 724 aaKnown RBP eCLIP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SPATA24Q86W54 205 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 ZNF280BQ86YH2 543 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 PCYOX1LQ8NBM8 494 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 NCSTNQ92542 709 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 IGSF8Q969P0 613 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 PHF21BQ96EK2 531 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 RPRD1AQ96P16 312 aaPredicted RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 SPATA16Q9BXB7 569 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 TFB2MQ9H5Q4 396 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 ALG9Q9H6U8 611 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 RRAGCQ9HB90 399 aa15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 INTS10Q9NVR2 710 aaKnown RBP15.5■□□□□ 0.07
TNFSF13-202ENST00000349228 NYNRINQ9P2P1 1898 aaKnown RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 TRIM24O15164 1050 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 NRP2O60462 931 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 SUPT7LO94864 414 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 HSPA8P11142 646 aaKnown RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CTGFP29279 349 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 ARSDP51689 593 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 RHDQ02161 417 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 ZNF235Q14590 738 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CTXN3Q4LDR2 81 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 UNC50Q53HI1 259 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 RAP1GAP2Q684P5 730 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 PGBD5Q8N414 524 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CYP2S1Q96SQ9 504 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CDK5RAP1Q96SZ6 601 aaKnown RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 SH3GL3Q99963 347 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 SEMA3CQ99985 751 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 EFHD1Q9BUP0 239 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 COPS7BQ9H9Q2 264 aaPredicted RBP15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 SYTL2Q9HCH5 934 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 CROTQ9UKG9 612 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 PACSIN3Q9UKS6 424 aa15.49■□□□□ 0.07
TNFSF13-202ENST00000349228 VPS4BO75351 444 aa15.48■□□□□ 0.07
TNFSF13-202ENST00000349228 SERPINF2P08697 491 aa15.48■□□□□ 0.07
TNFSF13-202ENST00000349228 CD1DP15813 335 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms