RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 LENG8Q96PV6 779 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 CDH19Q9H159 772 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 PEX11BO96011 259 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 LYNP07948 512 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 MMP2P08253 660 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 GFAPP14136 432 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ADRA1AP35348 466 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 PDAP1Q13442 181 aaKnown RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 CDH18Q13634 790 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 PFKFB4Q16877 469 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 FRMD7Q6ZUT3 714 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ARHGAP22Q7Z5H3 698 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 HPS6Q86YV9 775 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 SSX2IPQ9Y2D8 614 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 VWA7Q9Y334 891 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 SERPINA6P08185 405 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 VEPH1Q14D04 833 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 FAM83EQ2M2I3 478 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 LSM12Q3MHD2 195 aaKnown RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ZNF697Q5TEC3 545 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 TMCO4Q5TGY1 634 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 RIPOR1Q6ZS17 1223 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 ULK2Q8IYT8 1036 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 BBS5Q8N3I7 341 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 KNL1Q8NG31 2342 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 HBEGFQ99075 208 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 TNKS2Q9H2K2 1166 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
TRIM4-201ENST00000349062 CLIC5Q9NZA1 410 aa13.94□□□□□ -0.18
TRIM4-201ENST00000349062 RHOBTB1O94844 696 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 ALPIP09923 528 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 MYL4P12829 197 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 NDST2P52849 883 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 NAB1Q13506 487 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 SEMA3AQ14563 771 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 LIPMQ5VYY2 423 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 LPCAT4Q643R3 524 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 VWA8A3KMH1 1905 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 CD3EAPO15446 510 aaKnown RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 PGM3O95394 542 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 SBK3P0C264 359 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 KCNC1P48547 511 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 RPL14P50914 215 aaKnown RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 ELAVL2Q12926 359 aaKnown RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 EIF4EBP2Q13542 120 aaPredicted RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 GRAMD1BQ3KR37 738 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 KLC3Q6P597 504 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 CYS1Q717R9 158 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 MRPL9Q9BYD2 267 aaKnown RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
TRIM4-201ENST00000349062 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
TRIM4-201ENST00000349062 OR1I1O60431 355 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 GPC4O75487 556 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 STC2O76061 302 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 URODP06132 367 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 CHRM3P20309 590 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 TUFMP49411 452 aaKnown RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 PPP1R3AQ16821 1122 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 MSANTD2Q6P1R3 559 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 APBB2Q92870 758 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 NSMCE3Q96MG7 304 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 PRICKLE1Q96MT3 831 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 TSEN34Q9BSV6 310 aaKnown RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 CCDC106Q9BWC9 280 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 MRPL46Q9H2W6 279 aaKnown RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 SLC7A8Q9UHI5 535 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 ASB3Q9Y575 518 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 NDUFS3O75489 264 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 SRP72O76094 671 aaKnown RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 ANPEPP15144 967 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 GABRR2P28476 465 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 MAGEA11P43364 429 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 DSG1Q02413 1049 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 MYLK4Q86YV6 388 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 TMPRSS6Q8IU80 811 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 TNFRSF12AQ9NP84 129 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 RHBDL2Q9NX52 303 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 CCDC167Q9P0B6 97 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 STX18Q9P2W9 335 aaKnown RBP13.92□□□□□ -0.18
TRIM4-201ENST00000349062 PPM1HQ9ULR3 514 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
TRIM4-201ENST00000349062 AK5Q9Y6K8 562 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms