RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SMOXQ9NWM0 555 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 RUVBL2Q9Y230 463 aaKnown RBP15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ERGIC3Q9Y282 383 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ACOT9Q9Y305 439 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 MTF2Q9Y483 593 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-202ENST00000347617 NME7Q9Y5B8 376 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CFAP99D6REC4 459 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 GOLGA8TH3BQL2 631 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 ARVCFO00192 962 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 PLOD2O00469 737 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 NRP2O60462 931 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 RASAL1O95294 804 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CPNE6O95741 557 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 EOMESO95936 686 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 GPIP06744 558 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 SBK3P0C264 359 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CKBP12277 381 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CD1EP15812 388 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 HOXD12P35452 270 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 LHX1P48742 406 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 TMED10P49755 219 aaKnown RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 RGS7P49802 495 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 ATXN3P54252 364 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 RPS3AP61247 264 aaKnown RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 ATP6V0D1P61421 351 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 PRAMEP78395 509 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 GALNT2Q10471 571 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 RAB39AQ14964 217 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF618Q5T7W0 954 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 PMF1Q6P1K2 205 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 C12orf29Q8N999 325 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 GRIN3AQ8TCU5 1115 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CENPNQ96H22 339 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 HSFY1Q96LI6 401 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 MRPL57Q9BQC6 102 aaKnown RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 NEURL2Q9BR09 285 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 PCDHAC1Q9H158 963 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 MRPL46Q9H2W6 279 aaKnown RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 STARD7Q9NQZ5 370 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 RGS18Q9NS28 235 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 TRHDEQ9UKU6 1024 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 SLC39A10Q9ULF5 831 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 FZD10Q9ULW2 581 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 CDC14AQ9UNH5 594 aa15.93■□□□□ 0.14
HMGA1-202ENST00000347617 HEMK1Q9Y5R4 338 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-202ENST00000347617 A0A087X1B8 175 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 PRORSD1PA6NEY8 169 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TK2O00142 265 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CLOCKO15516 846 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 MFSD11O43934 449 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CCNA2P20248 432 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FGFR3P22607 806 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ATP5F1P24539 256 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CAPGP40121 348 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 HLCSP50747 726 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CCR3P51677 355 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 BCAT1P54687 386 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 BST2Q10589 180 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 USP10Q14694 798 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 BCL2A1Q16548 175 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 AARS2Q5JTZ9 985 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 LCN8Q6JVE9 175 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ANKRD26P1Q6NSI1 321 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TRAF7Q6Q0C0 670 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ZC3HC1Q86WB0 502 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF784Q8NCA9 323 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FAM156AQ8NDB6 213 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 OR52K1Q8NGK4 314 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CCDC138Q96M89 665 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 LGMNQ99538 433 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ADAM2Q99965 735 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CORO1BQ9BR76 489 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GPN2Q9H9Y4 310 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TRPC7Q9HCX4 862 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 AGPAT4Q9NRZ5 378 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 E2F8A0AVK6 867 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 K7EPI3 171 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 DLX3O60479 287 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 MGEA5O60502 916 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 CNOT3O75175 753 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GPC4O75487 556 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TIPRLO75663 272 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FUCA1P04066 466 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ALOX5P09917 674 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 COL6A1P12109 1028 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 HSD17B1P14061 328 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GOT1P17174 413 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 PSMA4P25789 261 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GABRB3P28472 473 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 FAM189BP81408 668 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 GRM3Q14832 879 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 DLG2Q15700 870 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 ANKDD1AQ495B1 522 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 AGKQ53H12 422 aa15.92■□□□□ 0.14
HMGA1-202ENST00000347617 INTS6LQ5JSJ4 861 aaKnown RBP15.92■□□□□ 0.14
HMGA1-202ENST00000347617 TBCELQ5QJ74 424 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms