RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 RGRP47804 291 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 NR6A1Q15406 480 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CCDC153Q494R4 210 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 KRT80Q6KB66 452 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ANKS3Q6ZW76 656 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ANKLE1Q8NAG6 615 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ANKRD49Q8WVL7 239 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 MRGPRX2Q96LB1 330 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 OLFM3Q96PB7 478 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 OLFM1Q99784 485 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 VCXQ9H320 206 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 DONSONQ9NYP3 566 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 MOCS1Q9NZB8 636 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ZCWPW2A0A1B0GU75 182 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 PFDN6O15212 129 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 RFPL2O75678 378 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 LRATO95237 230 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 NFKBIAP25963 317 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 PIK3R1P27986 724 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 SLC18A2Q05940 514 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 KLF10Q13118 480 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■■□ 25
CASC4-202ENST00000345795 VPS26BQ4G0F5 336 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 LZTR1Q8N653 840 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 FNDC5Q8NAU1 212 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 OR4L1Q8NH43 312 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 SERPINI1Q99574 410 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 SEPT3Q9UH03 358 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 H3BMM5 538 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CDC7O00311 574 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CNPP09543 421 aaKnown RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 HGFP14210 728 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CCNCP24863 283 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CNTFP26441 200 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 ETV4P43268 484 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 AGTR2P50052 363 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 BRMS1LQ5PSV4 323 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 LIPMQ5VYY2 423 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 MBLAC2Q68D91 279 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 CUZD1Q86UP6 607 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 ARHGAP18Q8N392 663 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 TXNDC5Q8NBS9 432 aaKnown RBP13.34□□□□□ -0.27
CASC4-202ENST00000345795 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CLPBQ9H078 707 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 CDH19Q9H159 772 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 DOCK1Q14185 1865 aa13.34□□□□□ -0.27
CASC4-202ENST00000345795 MAGEB16A2A368 324 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 TRIM24O15164 1050 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 LTA4HP09960 611 aaKnown RBP13.33□□□□□ -0.27
CASC4-202ENST00000345795 VHLP40337 213 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 BNC2Q6ZN30 1099 aaPredicted RBP13.33□□□□□ -0.27
CASC4-202ENST00000345795 KYQ8NBH2 561 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 WDR41Q9HAD4 459 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 TMEM161AQ9NX61 479 aa13.33□□□□□ -0.27
CASC4-202ENST00000345795 CAPN8A6NHC0 703 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 H7C4K7 107 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 COCHO43405 550 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 CXCL14O95715 111 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 MPOP05164 745 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 BMP1P13497 986 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 VEGFBP49765 207 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 CASP9P55211 416 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ADAM17P78536 824 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 KLC1Q07866 573 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 PRKAA1Q13131 559 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 DOK6Q6PKX4 331 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 OR10Q1Q8NGQ4 319 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 METTL6Q8TCB7 284 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ATAD5Q96QE3 1844 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 KANSL1LA0AUZ9 987 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 OR2AG2A6NM03 316 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ZNF839A8K0R7 811 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ACSL4O60488 711 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 SGSHP51688 502 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 DEFB103AP81534 67 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 NPAS4Q8IUM7 802 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 NTAN1Q96AB6 310 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 HGH1Q9BTY7 390 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 CASS4Q9NQ75 786 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms