RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 POC1B-GALNT4F8VUJ3 575 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GPRIN2O60269 458 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CYP3A7P24462 503 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PTH1RQ03431 593 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SYT16Q17RD7 645 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 AGAP6Q5VW22 663 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 LPCAT4Q643R3 524 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ULK3Q6PHR2 472 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CXXC5Q7LFL8 322 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CADM3Q8N126 398 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 AGAP4Q96P64 663 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 OR51E2Q9H255 320 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SPANXCQ9NY87 97 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM240BA0A1B0GVZ2 78 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PEX11AO75192 247 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UQCRFS1P1P0C7P4 283 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SNRPFP62306 86 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CENPCQ03188 943 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TWF1Q12792 350 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 STILQ15468 1287 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ATP13A4Q4VNC1 1196 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 METTL4Q8N3J2 472 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SPAG4Q9NPE6 437 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SMYD2Q9NRG4 433 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 EPHA6Q9UF33 1036 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 DLGAP4Q9Y2H0 992 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 DISC1C4P0D8 188 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 E7ENX8 843 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 KITLGP21583 273 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GALK1P51570 392 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARF1P84077 181 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SMARCB1Q12824 385 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NKAIN3Q8N8D7 197 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 IPCEF1Q8WWN9 437 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRDM11Q9NQV5 511 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARHGEF4Q9NR80 690 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MTMR4Q9NYA4 1195 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRELID3BQ9Y3B1 194 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ITSN2Q9NZM3 1697 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 C5orf58C9J3I9 102 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT1A9O60656 530 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FGGP02679 453 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 HDCP19113 662 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT1A6P19224 532 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRKAR2BP31323 418 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CACNB3P54284 484 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PSMA6P60900 246 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ABRQ12979 859 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MAPK7Q13164 816 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 GRB14Q14449 540 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 LLGL1Q15334 1064 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 KCNJ8Q15842 424 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ANGEL2Q5VTE6 544 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RBM44Q6ZP01 1051 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RASGEF1CQ8N431 466 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PPM1MQ96MI6 270 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT1A7Q9HAW7 530 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT1A10Q9HAW8 530 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT1A8Q9HAW9 530 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MKNK2Q9HBH9 465 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CALML5Q9NZT1 146 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHGC3Q9UN70 934 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 KCNK7Q9Y2U2 307 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SAMHD1Q9Y3Z3 626 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 NUBP2Q9Y5Y2 271 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 LEPRP48357 1165 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CREMQ03060 361 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CBLBQ13191 982 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 LCN1P1Q5VSP4 162 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 METTL11BQ5VVY1 283 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 C12orf45Q8N5I9 185 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CHFRQ96EP1 664 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TRIM9Q9C026 710 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ABCD4O14678 606 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PGRMC2O15173 223 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SELENOFO60613 162 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TSPAN12O95859 305 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PFKFB1P16118 471 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CTNNB1P35222 781 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 UGT2B10P36537 528 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SP140Q13342 867 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM83EQ2M2I3 478 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MEIOBQ8N635 442 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CENPIQ92674 756 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CXorf21Q9HAI6 301 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 AGO2Q9UKV8 859 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RFPL2O75678 378 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ACADMP11310 421 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PBX1P40424 430 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ARSDP51689 593 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 YWHAZP63104 245 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 RNF220Q5VTB9 566 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 DPH6Q7L8W6 267 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 C3orf14Q9HBI5 128 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 FAM155AB1AL88 458 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TOX4O94842 621 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PGK1P00558 417 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 SRGNP10124 158 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 JUNBP17275 347 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms