RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 JUNP05412 331 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 YES1P07947 543 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 HSD17B1P14061 328 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 DDX5P17844 614 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ACO1P21399 889 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CRHBPP24387 322 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GRM5P41594 1212 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TPD52P55327 224 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 MYL6P60660 151 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TNK2Q07912 1038 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TARDBPQ13148 414 aaKnown RBP eCLIP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 AQP6Q13520 282 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 IRF5Q13568 498 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PSMD5Q16401 504 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CTF1Q16619 201 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PAGE2BQ5JRK9 111 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ATAD3CQ5T2N8 411 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PTAR1Q7Z6K3 402 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CCDC185Q8N715 623 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TRPV3Q8NET8 790 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 SLC7A14Q8TBB6 771 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 SEPT1Q8WYJ6 367 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 FIG4Q92562 907 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GLMNQ92990 594 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 RIPOR3Q96MK2 946 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 APOL4Q9BPW4 351 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 TMEM246Q9BRR3 403 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF577Q9BSK1 485 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 BDH2Q9BUT1 245 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF717Q9BY31 904 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 WDR55Q9H6Y2 383 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PLAC1Q9HBJ0 212 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GBA2Q9HCG7 927 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 RPRD1BQ9NQG5 326 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 OXSMQ9NWU1 459 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ACTR3BQ9P1U1 418 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF639Q9UID6 485 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 VWA7Q9Y334 891 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 MTF2Q9Y483 593 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GREB1LQ9C091 1923 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 MYH9P35579 1960 aaKnown RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PNMA8CA0A1B0GUJ8 204 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 KCNU1A8MYU2 1149 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 G3V2L1 256 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 H0YCG3 227 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 TBC1D4O60343 1298 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 LRCH4O75427 683 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 KATNA1O75449 491 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 DDHD2O94830 711 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 CHRNA1P02708 482 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PRKCGP05129 697 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 SNRPB2P08579 225 aaKnown RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 MPSTP25325 297 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 HTR1BP28222 390 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 LRPAP1P30533 357 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 CDH5P33151 784 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 RFC2P35250 354 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PTPN9P43378 593 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 SRP54P61011 504 aaKnown RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 GTF2IP78347 998 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 GALK2Q01415 458 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 GABPAQ06546 454 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 FOXM1Q08050 763 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 FASTKQ14296 549 aaKnown RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 TXNRD3NBQ6F5E7 133 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 C8orf82Q6P1X6 216 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PNCKQ6P2M8 343 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 TMEM270Q6UE05 265 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ZYG11AQ6WRX3 759 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ATG14Q6ZNE5 492 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ZFPM1Q8IX07 1006 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PCDH20Q8N6Y1 951 aaKnown RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 C2orf69Q8N8R5 385 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 OR6F1Q8NGZ6 308 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 SLC2A14Q8TDB8 520 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 KCTD14Q9BQ13 255 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 CALN1Q9BXU9 219 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 MMP27Q9H306 513 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ABCB10Q9NRK6 738 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 SNX15Q9NRS6 342 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ASNSD1Q9NWL6 643 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 SAE1Q9UBE0 346 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-201ENST00000343524 MORF4L1Q9UBU8 362 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 ATPIF1Q9UII2 106 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PDE10AQ9Y233 779 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 NAALAD2Q9Y3Q0 740 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 PCDHGB1Q9Y5G3 927 aa8.15□□□□□ -1.1
ATG4A-201ENST00000343524 MKI67P46013 3256 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms