RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RAI2Q9Y5P3 530 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 CFAP47Q6ZTR5 3102 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 FREM2Q5SZK8 3169 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 PLXNB3Q9ULL4 1909 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 EME2A4GXA9 379 aaPredicted RBP20.21■□□□□ 0.83
SYNE2-201ENST00000341472 MFSD11O43934 449 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 PGLSO95336 258 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 ALPIP09923 528 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 CYP2A6P11509 494 aaPredicted RBP20.21■□□□□ 0.83
SYNE2-201ENST00000341472 KRT10P13645 584 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 MX2P20592 715 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 CES1P23141 567 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 KELP23276 732 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 CCNCP24863 283 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 ARHGAP25P42331 645 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 C6orf132Q5T0Z8 1188 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 ESRP1Q6NXG1 681 aaKnown RBP20.21■□□□□ 0.83
SYNE2-201ENST00000341472 GUSBP11Q6P575 273 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 C19orf48Q6RUI8 117 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 NDUFAF2Q8N183 169 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 SDR16C5Q8N3Y7 309 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 TPCN2Q8NHX9 752 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 RAPGEF5Q92565 580 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 MAML1Q92585 1016 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 FUBP1Q96AE4 644 aaKnown RBP20.21■□□□□ 0.83
SYNE2-201ENST00000341472 SCRN2Q96FV2 425 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 COQ10AQ96MF6 247 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 SPTLC3Q9NUV7 552 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 HAUS2Q9NVX0 235 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 KCTD5Q9NXV2 234 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 GULP1Q9UBP9 304 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 URB1O60287 2271 aaKnown RBP20.21■□□□□ 0.83
SYNE2-201ENST00000341472 ZFYVE26Q68DK2 2539 aa20.21■□□□□ 0.83
SYNE2-201ENST00000341472 AKR1B15C9JRZ8 316 aaPredicted RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 PDE2AO00408 941 aaPredicted RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 HEXIM1O94992 359 aaKnown RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 MAP3K6O95382 1288 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 GM2AP17900 193 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 KDELR1P24390 212 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 TRIM23P36406 574 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 CNGA3Q16281 694 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 DENND2CQ68D51 928 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 PNCKQ6P2M8 343 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 CNGA4Q8IV77 575 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 CBARPQ8N350 705 aaPredicted RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 PQLC3Q8N755 202 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 FATE1Q969F0 183 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 FAF2Q96CS3 445 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 RNF157Q96PX1 679 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 DEPDC7Q96QD5 511 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 POLR1EQ9GZS1 481 aaKnown RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 RALYQ9UKM9 306 aaKnown RBP20.2■□□□□ 0.82
SYNE2-201ENST00000341472 PADI4Q9UM07 663 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 LHX6Q9UPM6 363 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 GPSM3Q9Y4H4 160 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 DGKBQ9Y6T7 804 aa20.2■□□□□ 0.82
SYNE2-201ENST00000341472 DSPP15924 2871 aaKnown RBP20.19■□□□□ 0.82
SYNE2-201ENST00000341472 TMEM202A6NGA9 273 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 TNFRSF10CO14798 259 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 CELA2BP08218 269 aaPredicted RBP20.19■□□□□ 0.82
SYNE2-201ENST00000341472 KIAA1024LP59773 190 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 GBE1Q04446 702 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 ARHGEF7Q14155 803 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 GKN2Q86XP6 184 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 RHOT2Q8IXI1 618 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 SLC35F3Q8IY50 421 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 CCNYQ8ND76 341 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 OR56A4Q8NGH8 313 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 HNRNPLLQ8WVV9 542 aaKnown RBP20.19■□□□□ 0.82
SYNE2-201ENST00000341472 PIH1D2Q8WWB5 315 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 OR1E3Q8WZA6 343 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 NAT6Q93015 286 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 MAK16Q9BXY0 300 aaKnown RBP20.19■□□□□ 0.82
SYNE2-201ENST00000341472 AMACRQ9UHK6 382 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 PPIL1Q9Y3C6 166 aa20.19■□□□□ 0.82
SYNE2-201ENST00000341472 FAM208BQ5VWN6 2430 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 MTA2O94776 668 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 CCNB1P14635 433 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 CTPS1P17812 591 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 SLC10A2Q12908 348 aaPredicted RBP20.18■□□□□ 0.82
SYNE2-201ENST00000341472 TBX2Q13207 712 aaPredicted RBP20.18■□□□□ 0.82
SYNE2-201ENST00000341472 TCEA2Q15560 299 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 NYAP1Q6ZVC0 841 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 USP45Q70EL2 814 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 HSD11B1LQ7Z5J1 315 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.18■□□□□ 0.82
SYNE2-201ENST00000341472 NUS1Q96E22 293 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 MCCC1Q96RQ3 725 aaPredicted RBP20.18■□□□□ 0.82
SYNE2-201ENST00000341472 WDR26Q9H7D7 661 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 GPR34Q9UPC5 381 aa20.18■□□□□ 0.82
SYNE2-201ENST00000341472 LRRD1A4D1F6 860 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PSMD11O00231 422 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 FZD6O60353 706 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 CSO75390 466 aaKnown RBP20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PDHA1P08559 390 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 TGM2P21980 687 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PTPRRQ15256 657 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 Q6ZVL8 140 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 ARL10Q8N8L6 244 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 LRRN4Q8WUT4 740 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms