RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 SNRNP25Q9BV90 132 aaKnown RBP13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 DPEP2Q9H4A9 486 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 AKAP7Q9P0M2 348 aaPredicted RBP13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 SCINQ9Y6U3 715 aa13.11□□□□□ -0.31
NECTIN1-203ENST00000341398 ATMQ13315 3056 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 TMEM191CA6NGB0 347 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 J3QKU1 62 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 TEX33O43247 280 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 FTLP02792 175 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 PRKCGP05129 697 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ANP32AP39687 249 aaKnown RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ARL4AP40617 200 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 CLN3Q13286 438 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ZNF235Q14590 738 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ASIC2Q16515 512 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 PNCKQ6P2M8 343 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 XKR5Q6UX68 686 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ZSWIM9Q86XI8 627 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 PLA2G15Q8NCC3 412 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 TTC9Q92623 222 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 FUBP1Q96AE4 644 aaKnown RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 TRIM11Q96F44 468 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 MED8Q96G25 268 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 CMKLR1Q99788 373 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 WDR26Q9H7D7 661 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 TAS2R14Q9NYV8 317 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 LRIT1Q9P2V4 623 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 ATXN7L1Q9ULK2 861 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-203ENST00000341398 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 TMEM202A6NGA9 273 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 CYSRT1A8MQ03 144 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 H3BRJ5 948 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 NVLO15381 856 aaKnown RBP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 CYP2A6P11509 494 aaPredicted RBP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 KRT10P13645 584 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 MIPP30301 263 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 RGRP47804 291 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 PDX1P52945 283 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 BIRC2Q13490 618 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 LY6DQ14210 128 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 CA9Q16790 459 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 C14orf28Q4W4Y0 310 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 B3GNT8Q7Z7M8 397 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 ARHGAP12Q8IWW6 846 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 OR1E3Q8WZA6 343 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 ACSL6Q9UKU0 697 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 PCDHB11Q9Y5F2 797 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 SCN8AQ9UQD0 1980 aa13.09□□□□□ -0.31
NECTIN1-203ENST00000341398 PRSS38A1L453 326 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 A8MX80 341 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 B4DGG1 531 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 B8ZZF3 427 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 SOCS5O75159 536 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 MBD3O95983 291 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 MYBL1P10243 752 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 MYCLP1P12525 358 aaPredicted RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 RALGDSQ12967 914 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 TMCO3Q6UWJ1 677 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 USP53Q70EK8 1073 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 PIM3Q86V86 326 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 AOPEPQ8N6M6 819 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 PDCD6IPQ8WUM4 868 aaKnown RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 NUS1Q96E22 293 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 GSDMCQ9BYG8 508 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 FGF22Q9HCT0 170 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 MRPL40Q9NQ50 206 aaKnown RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 PISDQ9UG56 409 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 LOXL2Q9Y4K0 774 aa13.08□□□□□ -0.31
NECTIN1-203ENST00000341398 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms