RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 APOBEC3BQ9UH17 382 aaKnown RBP14.65□□□□□ -0.06
ERCC1-203ENST00000340192 PCDHGA1Q9Y5H4 931 aa14.65□□□□□ -0.06
ERCC1-203ENST00000340192 DUSP10Q9Y6W6 482 aa14.65□□□□□ -0.06
ERCC1-203ENST00000340192 MAP1BP46821 2468 aaKnown RBP14.65□□□□□ -0.06
ERCC1-203ENST00000340192 FZD6O60353 706 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 HEXIM1O94992 359 aaKnown RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 C1SP09871 688 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 ALPIP09923 528 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 ALPPL2P10696 532 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 CYP2A6P11509 494 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 KRT10P13645 584 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 CTPS1P17812 591 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 LHCGRP22888 699 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 MARCKSL1P49006 195 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 IFI35P80217 286 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 NFATC4Q14934 902 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 LLGL1Q15334 1064 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SMAD1Q15797 465 aaKnown RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 TFDP3Q5H9I0 405 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 FAM182AQ5T1J6 154 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 FAXCQ5TGI0 409 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 KAZNQ674X7 775 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 DENND2CQ68D51 928 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 CCNI2Q6ZMN8 369 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SPOCD1Q6ZMY3 1216 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 USP45Q70EL2 814 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 TMPRSS7Q7RTY8 843 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 TSPAN33Q86UF1 283 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 TMEM139Q8IV31 216 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 KATNAL2Q8IYT4 538 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 PHACTR4Q8IZ21 702 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SPC24Q8NBT2 197 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 ACRBPQ8NEB7 543 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 LMX1AQ8TE12 382 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 IL12RB2Q99665 862 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SLC13A1Q9BZW2 595 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 IMPACTQ9P2X3 320 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SAE1Q9UBE0 346 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.64□□□□□ -0.07
ERCC1-203ENST00000340192 PPIL1Q9Y3C6 166 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 CSNK1G3Q9Y6M4 447 aa14.64□□□□□ -0.07
ERCC1-203ENST00000340192 A0A0U1RQS6 177 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 K7ESM1 405 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 PPP1R12AO14974 1030 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CST8O60676 142 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 GCATO75600 419 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 ZRANB2O95218 330 aaKnown RBP eCLIP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 MMP2P08253 660 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 ACP1P24666 158 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 HTR1BP28222 390 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 HNF1BP35680 557 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 ETV3P41162 512 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 NR2C2P49116 596 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 EPHB1P54762 984 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 PPARDQ03181 441 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 ADCY2Q08462 1091 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 TFDP2Q14188 446 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 DEFB133Q30KQ1 61 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 PRRT3Q5FWE3 981 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 ENPP7Q6UWV6 458 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 NYAP1Q6ZVC0 841 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 HSD11B1LQ7Z5J1 315 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 MARCH9Q86YJ5 346 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CCDC50Q8IVM0 306 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 RCOR2Q8IZ40 523 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CBARPQ8N350 705 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 GALNT15Q8N3T1 639 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CNTD1Q8N815 330 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 KRT35Q92764 455 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 TSACCQ96A04 125 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 FUBP1Q96AE4 644 aaKnown RBP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 NUS1Q96E22 293 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CALR3Q96L12 384 aaKnown RBP14.63□□□□□ -0.07
ERCC1-203ENST00000340192 APOLD1Q96LR9 279 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 SMIM14Q96QK8 99 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 LRRC61Q9BV99 259 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 DUSP23Q9BVJ7 150 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 CEP41Q9BYV8 373 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 LACRTQ9GZZ8 138 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 BRD8Q9H0E9 1235 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 SEPT10Q9P0V9 454 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 SPASTQ9UBP0 616 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 DMXL2Q8TDJ6 3036 aa14.63□□□□□ -0.07
ERCC1-203ENST00000340192 MYLKQ15746 1914 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 hCG_1818297A0A087WSY0 165 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 LY6G6EA0A0G2JKS1 128 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 A0A0J9YYE9 177 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 FAM149AA5PLN7 773 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 BTNL10A8MVZ5 291 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 PRLP01236 227 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 TRBC1P01850 177 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 PROS1P07225 676 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 CDK4P11802 303 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 CKMT1AP12532 417 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 MYF5P13349 255 aa14.62□□□□□ -0.07
ERCC1-203ENST00000340192 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms