RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ZYG11AQ6WRX3 759 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 GLT6D1Q7Z4J2 308 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 CMTR2Q8IYT2 770 aaKnown RBP15.5■□□□□ 0.07
MBD1-203ENST00000339998 LSMEM2Q8N112 164 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 BRSK1Q8TDC3 778 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 CDKN2AIPNLQ96HQ2 116 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 PPP1R2P1Q96PQ5 205 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 TDRD1Q9BXT4 1180 aaKnown RBP15.5■□□□□ 0.07
MBD1-203ENST00000339998 NUF2Q9BZD4 464 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 ZBP1Q9H171 429 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 ALG9Q9H6U8 611 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 GALPQ9UBC7 116 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 TSR3Q9UJK0 312 aaKnown RBP15.5■□□□□ 0.07
MBD1-203ENST00000339998 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 VWA7Q9Y334 891 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 PCDHB9Q9Y5E1 797 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.5■□□□□ 0.07
MBD1-203ENST00000339998 LTBP2Q14767 1821 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 B2RBV5 119 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 FGF1P05230 155 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 HLA-DPA1P20036 260 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 ZNF697Q5TEC3 545 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 BADQ92934 168 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 RANBP9Q96S59 729 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 CCDC106Q9BWC9 280 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 TNKS2Q9H2K2 1166 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 MFSD1Q9H3U5 465 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 PRUNE2Q8WUY3 3088 aa15.5■□□□□ 0.07
MBD1-203ENST00000339998 H0Y3Z8 333 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 OR1I1O60431 355 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 GLP2RO95838 553 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 SYN1P17600 705 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 TNK2Q07912 1038 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 CAMK1DQ8IU85 385 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 MFN1Q8IWA4 741 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 PIANPQ8IYJ0 282 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 SAR1AQ9NR31 198 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 HCFC2Q9Y5Z7 792 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 TRANK1O15050 2925 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 GYG2O15488 501 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 SLC7A4O43246 635 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 ZBTB14O43829 449 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 PDCD2Q16342 344 aaPredicted RBP15.49■□□□□ 0.07
MBD1-203ENST00000339998 LIPMQ5VYY2 423 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 TMEM198Q66K66 360 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 EFCAB3Q8N7B9 438 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 TCF25Q9BQ70 676 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 SLC46A2Q9BY10 475 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 NKX1-2Q9UD57 310 aaPredicted RBP15.49■□□□□ 0.07
MBD1-203ENST00000339998 FKBPLQ9UIM3 349 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 OBSL1O75147 1896 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 PLXNA4Q9HCM2 1894 aa15.49■□□□□ 0.07
MBD1-203ENST00000339998 LRRC14BA6NHZ5 514 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 LRG1P02750 347 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 FMO4P31512 558 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CD70P32970 193 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CTSOP43234 321 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 POU4F1Q01851 419 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 SPDYAQ5MJ70 313 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 PSAPL1Q6NUJ1 521 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 SETD3Q86TU7 594 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 TMC8Q8IU68 726 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 BBS5Q8N3I7 341 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 TMEM199Q8N511 208 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 RBM15BQ8NDT2 890 aaKnown RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 OR4L1Q8NH43 312 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 EID2BQ96D98 161 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CDH19Q9H159 772 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 DENND2DQ9H6A0 471 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 DNAH14Q0VDD8 3507 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 GSC2O15499 205 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 DCXO43602 365 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 ARHGEF15O94989 841 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 LUC7L3O95232 432 aaKnown RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 CTSAP10619 480 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 MYOGP15173 224 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 STK19P49842 368 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 RHOAP61586 193 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 NTHL1P78549 312 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CFAP157Q5JU67 520 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 HERC6Q8IVU3 1022 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CMTM8Q8IZV2 173 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 FIBCD1Q8N539 461 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.48■□□□□ 0.07
MBD1-203ENST00000339998 KREMEN2Q8NCW0 462 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 PTERQ96BW5 349 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 BTBD10Q9BSF8 475 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 LRRC3Q9BY71 257 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 LHX3Q9UBR4 397 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 EVLQ9UI08 416 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 ANKRD6Q9Y2G4 727 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 RPP40O75818 363 aaKnown RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 PAPSS2O95340 614 aaPredicted RBP15.48■□□□□ 0.07
MBD1-203ENST00000339998 TFEBP19484 476 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CRABP2P29373 138 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 PMLP29590 882 aa15.48■□□□□ 0.07
MBD1-203ENST00000339998 CA5AP35218 305 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms