RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SLC12A1Q13621 1099 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SETDB1Q15047 1291 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PABPC1LQ4VXU2 614 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 FBXO48Q5FWF7 155 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 GPR158Q5T848 1215 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ASRGL1Q7L266 308 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ITIH5Q86UX2 942 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 CRLF3Q8IUI8 442 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SHKBP1Q8TBC3 707 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 MAPK15Q8TD08 544 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ING5Q8WYH8 240 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SKA1Q96BD8 255 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF599Q96NL3 588 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 OSBPL1AQ9BXW6 950 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PRKD2Q9BZL6 878 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ACTR5Q9H9F9 607 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 CYP4F12Q9HCS2 524 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 IGSF5Q9NSI5 407 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 EVLQ9UI08 416 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 OBSL1O75147 1896 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 FCHO1O14526 889 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF195O14628 629 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 CD3EAPO15446 510 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 DNAJC8O75937 253 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SERPINE1P05121 402 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 FGF1P05230 155 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 JUNP05412 331 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ARSAP15289 507 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 HLA-DPA1P20036 260 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 HLA-FP30511 346 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP3CCP48454 512 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 ELF3P78545 371 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 UBAP2LQ14157 1087 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 DGKKQ5KSL6 1271 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 GLT6D1Q7Z4J2 308 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 C12orf76Q8N812 135 aaPredicted RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 TXNDC5Q8NBS9 432 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 PIWIL2Q8TC59 973 aaKnown RBP7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 VOPP1Q96AW1 172 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 LRRC3BQ96PB8 259 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 RANBP9Q96S59 729 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 TNFRSF12AQ9NP84 129 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM51Q9NW97 253 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 OXSMQ9NWU1 459 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 VWA7Q9Y334 891 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 SH3BP1Q9Y3L3 701 aa7.42□□□□□ -1.22
SRFBP1-201ENST00000339397 LINC01553A4QN01 128 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM233B4DJY2 109 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC7A4O43246 635 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 TRIM13O60858 407 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 EPOP01588 193 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 TSPAN8P19075 237 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 MPSTP25325 297 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GRIA4P48058 902 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ABCE1P61221 599 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC153Q494R4 210 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 LRRC73Q5JTD7 316 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 C9orf50Q5SZB4 431 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 LRRC8EQ6NSJ5 796 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PSAPL1Q6NUJ1 521 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HTR3DQ70Z44 454 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 NAT16Q8N8M0 369 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 OR4L1Q8NH43 312 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 USP13Q92995 863 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PHF21BQ96EK2 531 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 RILPQ96NA2 401 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP1R2P1Q96PQ5 205 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 LBHD1Q9BQE6 289 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 MFSD1Q9H3U5 465 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GPAMQ9HCL2 828 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ASAH2Q9NR71 780 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ABCB8Q9NUT2 735 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PRKAG2Q9UGJ0 569 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM50BQ9Y247 325 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 MED16Q9Y2X0 877 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 DCTN3O75935 186 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 KLHL2O95198 593 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PAPSS2O95340 614 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GLP2RO95838 553 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 RHOP08100 348 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GSTA1P08263 222 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HSPA1AP0DMV8 641 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HSPA1BP0DMV9 641 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HNRNPLP14866 589 aaKnown RBP eCLIP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 WEE1P30291 646 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 FMO4P31512 558 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF140P52738 457 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 RHOAP61586 193 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC7A9P82251 487 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 CCDC15Q0P6D6 951 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 TUBB3Q13509 450 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 UGP2Q16851 508 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SETMARQ53H47 684 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ARL13AQ5H913 290 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PPM1LQ5SGD2 360 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms