RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NEDD9Q14511 834 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 STXBP5Q5T5C0 1151 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 CCDC181Q5TID7 509 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 SFMBT2Q5VUG0 894 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 SULT6B1Q6IMI4 303 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 TRNP1Q6NT89 227 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 CHERPQ8IWX8 916 aaKnown RBP2.38□□□□□ -2.03
XRCC4-202ENST00000338635 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 GDPD5Q8WTR4 605 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 HSPH1Q92598 858 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 LINC00479Q96M42 142 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 ASCL2Q99929 193 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 CRB3Q9BUF7 120 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 WDR13Q9H1Z4 485 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 PDZD7Q9H5P4 517 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 FKRPQ9H9S5 495 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 NFE2L3Q9Y4A8 694 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 ADGRF5Q8IZF2 1346 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 E7EVH7 732 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ACKR2O00590 384 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ITGAXP20702 1163 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 S1PR1P21453 382 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 SERPINF1P36955 418 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 RBM5P52756 815 aaKnown RBP eCLIP2.37□□□□□ -2.03
XRCC4-202ENST00000338635 KRTAP10-1P60331 282 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ATF7IPQ6VMQ6 1270 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 C15orf39Q6ZRI6 1047 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 PRSS45Q7RTY3 260 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF34Q8IZ26 560 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 RNF113BQ8IZP6 322 aaKnown RBP2.37□□□□□ -2.03
XRCC4-202ENST00000338635 DUSP19Q8WTR2 217 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF689Q96CS4 500 aaPredicted RBP2.37□□□□□ -2.03
XRCC4-202ENST00000338635 CCDC136Q96JN2 1154 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 TRIM15Q9C019 465 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 ARFGAP3Q9NP61 516 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 CNGB3Q9NQW8 809 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 TAF1P21675 1872 aa2.37□□□□□ -2.03
XRCC4-202ENST00000338635 KLRF2D3W0D1 207 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 IFIT2P09913 472 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF8P17098 575 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 HNF1BP35680 557 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 RUNX2Q13950 521 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 PUM3Q15397 648 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 CTF1Q16619 201 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TUBB8Q3ZCM7 444 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TCTE1Q5JU00 501 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 GPATCH4Q5T3I0 446 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 RGMBQ6NW40 437 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 IL20RBQ6UXL0 311 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 P2RY8Q86VZ1 359 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 C1orf87Q8N0U7 546 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 GJC3Q8NFK1 279 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TRIM58Q8NG06 486 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 FAM222BQ8WU58 562 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TMEM190Q8WZ59 177 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SNAPC3Q92966 411 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF653Q96CK0 615 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 KTI12Q96EK9 354 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SLC39A13Q96H72 371 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF414Q96IQ9 312 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ST6GAL2Q96JF0 529 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF354BQ96LW1 612 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 POLR3CQ9BUI4 534 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TTC12Q9H892 705 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 CISD1Q9NZ45 108 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 GRHPRQ9UBQ7 328 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TINAGQ9UJW2 476 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 AMDHD2Q9Y303 409 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 A0A0J9YWU9 116 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ABHD14A-ACY1A0A1B0GW23 586 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 H0Y3Z8 333 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF821O75541 412 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 KRT38O76015 456 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SORBS2O94875 1100 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SETSIPP0DME0 302 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF26P17031 533 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 CD58P19256 250 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 DCTP40126 519 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 PRKAA2P54646 552 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TNFAIP2Q03169 654 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 BTKQ06187 659 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 GOLGA8FQ08AF8 430 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TBL3Q12788 808 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ITGADQ13349 1161 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SMAD1Q15797 465 aaKnown RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 SLC18A3Q16572 532 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 CCSAPQ6IQ19 270 aaPredicted RBP2.36□□□□□ -2.03
XRCC4-202ENST00000338635 TOGARAM2Q6ZUX3 1019 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 FOXRED2Q8IWF2 684 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 STPG4Q8N801 248 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ANKRD52Q8NB46 1076 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 VPS37AQ8NEZ2 397 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 LINS1Q8NG48 757 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 WDR20Q8TBZ3 569 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 CSGALNACT1Q8TDX6 532 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 RNFT2Q96EX2 444 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 MASTLQ96GX5 879 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ART5Q96L15 291 aa2.36□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF624Q9P2J8 865 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms