RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 TMEM151AQ8N4L1 468 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 MYO19Q96H55 970 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 IGSF5Q9NSI5 407 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ABCB8Q9NUT2 735 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 XPR1Q9UBH6 696 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 HEY2Q9UBP5 337 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ZFP69BQ9UJL9 534 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 DNAJC16Q9Y2G8 782 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PER2O15055 1255 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 TRIM13O60858 407 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 H2AFYO75367 372 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 LPOP22079 712 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ARRB2P32121 409 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 KPNA2P52292 529 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 CDKN2DP55273 166 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ILF2Q12905 390 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 FAM45BPQ6NSW5 357 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 GRASPQ7Z6J2 395 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 TBC1D1Q86TI0 1168 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SPATA6LQ8N4H0 392 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 TTC30BQ8N4P2 665 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 OR6K2Q8NGY2 324 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 TTC8Q8TAM2 541 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 FAM45AQ8TCE6 357 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PPP4R1Q8TF05 950 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SKA1Q96BD8 255 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SORT1Q99523 831 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 TDP1Q9NUW8 608 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 EVLQ9UI08 416 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 VWA7Q9Y334 891 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ANKRD36A6QL64 1941 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SOBPA7XYQ1 873 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 TMEM114B3SHH9 223 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 TARM1B6A8C7 271 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 H0YHG0 523 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 PGLSO95336 258 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CA3P07451 260 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 PRSS56P0CW18 603 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CSNK1DP48730 415 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 EPHB1P54762 984 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 USP4Q13107 963 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CSHL1Q14406 222 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 PTPRRQ15256 657 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ZNF77Q15935 545 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 HSF5Q4G112 596 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ARMC12Q5T9G4 340 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ZNF549Q6P9A3 640 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 NAPRTQ6XQN6 538 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ATG14Q6ZNE5 492 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 SDCCAG8Q86SQ7 713 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-201ENST00000336128 TMEM25Q86YD3 366 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 HEXDCQ8WVB3 486 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 UNKQ9C0B0 810 aaKnown RBP12.46□□□□□ -0.41
ZNF548-201ENST00000336128 OXSMQ9NWU1 459 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 HACD3Q9P035 362 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 FKBPLQ9UIM3 349 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CORO1CQ9ULV4 474 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-201ENST00000336128 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 PCDHB9Q9Y5E1 797 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 NOTCH4Q99466 2003 aa12.46□□□□□ -0.41
ZNF548-201ENST00000336128 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 PIGNO95427 931 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 IGSF6O95976 241 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 CEBPBP17676 345 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 FDXRP22570 491 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 SERPINB3P29508 390 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 GRIA4P48058 902 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 STC1P52823 247 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 AQP5P55064 265 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 ZBTB16Q05516 673 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 GPM6BQ13491 265 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 FUT11Q495W5 492 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 SPDYAQ5MJ70 313 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 CAMK1DQ8IU85 385 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 ING5Q8WYH8 240 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 ZSWIM3Q96MP5 696 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 GATA5Q9BWX5 397 aaPredicted RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 WWP1Q9H0M0 922 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 TNKS2Q9H2K2 1166 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 MRPL46Q9H2W6 279 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms