RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 NPLOC4Q8TAT6 608 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 GPATCH1Q9BRR8 931 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SLC38A7Q9NVC3 462 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 IPO11Q9UI26 975 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 RIMS3Q9UJD0 308 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 DSEQ9UL01 958 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SH3PXD2BA1X283 911 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 J3QRK9 145 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 TADA2AO75478 443 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SRP72O76094 671 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 HLA-DQB2P05538 268 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 EPHX2P34913 555 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SLC7A2P52569 658 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SEMA3BQ13214 749 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 FBXO48Q5FWF7 155 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 POTEHQ6S545 545 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 FBXL8Q96CD0 374 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 COX4I2Q96KJ9 171 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 SIAEQ9HAT2 523 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 ENTPD7Q9NQZ7 604 aa16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 TUBA8Q9NY65 449 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP4-201ENST00000335793 NR5A2O00482 541 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 IPO13O94829 963 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 SNRPB2P08579 225 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 LRPAP1P30533 357 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 MAPK10P53779 464 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 EGFL7Q9UHF1 273 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 DENRO43583 198 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 CCR1P32246 355 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 HSPA13P48723 471 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 MYBPC1Q00872 1141 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 SCAPQ12770 1279 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 GRM2Q14416 872 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 GPR158Q5T848 1215 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 XKR5Q6UX68 686 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 LPCAT2Q7L5N7 544 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 TMEM151AQ8N4L1 468 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 SENP6Q9GZR1 1112 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 TRAF6Q9Y4K3 522 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 OR51F1A6NGY5 319 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 CCNCP24863 283 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 CD86P42081 329 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 CRYBB1P53674 252 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 TIGD5Q53EQ6 642 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 REP15Q6BDI9 236 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 DDHD1Q8NEL9 900 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 TSPAN14Q8NG11 270 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 ZFRQ96KR1 1074 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 MRPS26Q9BYN8 205 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 SPAG4Q9NPE6 437 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 MIOSQ9NXC5 875 aa16.57■□□□□ 0.24
CDC42EP4-201ENST00000335793 A0A087X1B8 175 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 A8MT66 165 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 CBFA2T3O75081 653 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 LTA4HP09960 611 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 POU4F1Q01851 419 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 LRP8Q14114 963 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 INAQ16352 499 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 MGAT5BQ3V5L5 792 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 HABP4Q5JVS0 413 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 SPPL2BQ8TCT7 592 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 GRIN3AQ8TCU5 1115 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 GIMAP2Q9UG22 337 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 CDH9Q9ULB4 789 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 ST3GAL5Q9UNP4 418 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 GABRDO14764 452 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 HMBSP08397 361 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 DNAJB2P25686 324 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 ADSLP30566 484 aaPredicted RBP16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 HK2P52789 917 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 TSTD2Q5T7W7 516 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 SDHAF4Q5VUM1 108 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 DHFR2Q86XF0 187 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 CPSF7Q8N684 471 aaKnown RBP16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 SCAIQ8N9R8 606 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 HDAC10Q969S8 669 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 NSMCE3Q96MG7 304 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 FCRL5Q96RD9 977 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 OLFM1Q99784 485 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 SP110Q9HB58 689 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 CPA4Q9UI42 421 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 V9GYQ6 96 aa16.56■□□□□ 0.24
CDC42EP4-201ENST00000335793 FAM149AA5PLN7 773 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 KDM1AO60341 852 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 NRP2O60462 931 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 F2P00734 622 aa16.55■□□□□ 0.24
CDC42EP4-201ENST00000335793 RBP1P09455 135 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms