RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SNX31Q8N9S9 440 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 FAM45AQ8TCE6 357 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 GCNAQ96QF7 691 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 GSTO2Q9H4Y5 243 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 CCSER2Q9H7U1 834 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 CCDC167Q9P0B6 97 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 PSMD12O00232 456 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 MUSKO15146 869 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 PEX1O43933 1283 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 GPC4O75487 556 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 GOT2P00505 430 aaKnown RBP17.75■□□□□ 0.43
LRCH3-201ENST00000334859 MAPRE2Q15555 327 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 AGKQ53H12 422 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 RNF180Q86T96 592 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 SPATA24Q86W54 205 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 ABI1Q8IZP0 508 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 CFAP52Q8N1V2 620 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 TADA1Q96BN2 335 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 TRAF6Q9Y4K3 522 aa17.75■□□□□ 0.43
LRCH3-201ENST00000334859 ATP6AP2A0A1C7CYW4 349 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 DRGXA6NNA5 263 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 UBFD1O14562 309 aaKnown RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 CD3EAPO15446 510 aaKnown RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 ATP6AP2O75787 350 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 FGF1P05230 155 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 IMPDH1P20839 514 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 PBX3P40426 434 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 KCNC1P48547 511 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 MRNIPQ6NTE8 343 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 CHSY3Q70JA7 882 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 ISCA2Q86U28 154 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 ST13P4Q8IZP2 240 aaPredicted RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 OR13C4Q8NGS5 318 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 PTERQ96BW5 349 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 DCUN1D1Q96GG9 259 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 FEM1CQ96JP0 617 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 CRISPLD1Q9H336 500 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 COPS7BQ9H9Q2 264 aaPredicted RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 SPATS2LQ9NUQ6 558 aaKnown RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 IL37Q9NZH6 218 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 CCDC162PA2VCL2 907 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 FAM155AB1AL88 458 aaPredicted RBP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 TLR5O60602 858 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 PRAMEF11O60813 436 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 HLA-DPA1P20036 260 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 PSME3P61289 254 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 STX5Q13190 355 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 ZNF678Q5SXM1 525 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 NADSYN1Q6IA69 706 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 HMGCLL1Q8TB92 370 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
LRCH3-201ENST00000334859 PIDD1Q9HB75 910 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 MRGBPQ9NV56 204 aa17.74■□□□□ 0.43
LRCH3-201ENST00000334859 MTMR11A4FU01 709 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 OR6C75A6NL08 312 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 BCAS2O75934 225 aaPredicted RBP17.73■□□□□ 0.43
LRCH3-201ENST00000334859 WISP3O95389 354 aaPredicted RBP17.73■□□□□ 0.43
LRCH3-201ENST00000334859 IGLV3-27P01718 113 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 HDCP19113 662 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 SLC26A3P40879 764 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 MAPKAPK2P49137 400 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 FOLH1Q04609 750 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 TNK2Q07912 1038 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 ADGRE1Q14246 886 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 GEN1Q17RS7 908 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 ZNF549Q6P9A3 640 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 LGI2Q8N0V4 545 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 DLG3Q92796 817 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 BTBD9Q96Q07 612 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 F5H5T6 163 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 TRIM38O00635 465 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 TACR2P21452 398 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 FDXRP22570 491 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 PMLP29590 882 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 KCNQ1P51787 676 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 INHBCP55103 352 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 CDH13P55290 713 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 YBEYP58557 167 aaPredicted RBP17.73■□□□□ 0.43
LRCH3-201ENST00000334859 HERVK_113P63132 956 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 GALNT1Q10472 559 aaPredicted RBP17.73■□□□□ 0.43
LRCH3-201ENST00000334859 SEMA3AQ14563 771 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 PDK3Q15120 406 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 REP15Q6BDI9 236 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 FBXL19Q6PCT2 694 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 TRAF7Q6Q0C0 670 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 GIPC2Q8TF65 315 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 L3HYPDHQ96EM0 354 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 GLT1D1Q96MS3 346 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 KLHL32Q96NJ5 620 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 ERVK-6Q9BXR3 956 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 CATSPERZQ9NTU4 200 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 CACNA2D2Q9NY47 1150 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 UTP6Q9NYH9 597 aaKnown RBP17.73■□□□□ 0.43
LRCH3-201ENST00000334859 EPS15L1Q9UBC2 864 aa17.73■□□□□ 0.43
LRCH3-201ENST00000334859 RIMS3Q9UJD0 308 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms