RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 LIASO43766 372 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RLN1P04808 185 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF37AP17032 561 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ACO1P21399 889 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GRIA4P48058 902 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GMPSP49915 693 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 MPP2Q14168 576 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF234Q14588 700 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 FOXR1Q6PIV2 292 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SLC44A3Q8N4M1 653 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 OR2T12Q8NG77 320 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 BCL2L14Q9BZR8 327 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SLA2Q9H6Q3 261 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 COG5Q9UP83 839 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NCKAP1Q9Y2A7 1128 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PLLPQ9Y342 182 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DUOX1Q9NRD9 1551 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SYNDIG1LA6NDD5 238 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 M0R233 179 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NUAK1O60285 661 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RARAP10276 462 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HGFP14210 728 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PVALBP20472 110 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 MAPK3P27361 379 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AXLP30530 894 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AGTR1P30556 359 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GRB10Q13322 594 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AKIRIN2Q53H80 203 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CIDECQ96AQ7 238 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF701M0R085 212 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 BTN3A1O00481 513 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NKRFO15226 690 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HBP1O60381 514 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CYP7B1O75881 506 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ANGPTL1O95841 491 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GNRH1P01148 92 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HMGCRP04035 888 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TPSB2P20231 275 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TPSAB1Q15661 275 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TCEAL6Q6IPX3 200 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ADGRF2Q8IZF7 708 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 OR5J2Q8NH18 312 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NACC2Q96BF6 587 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SPATA7Q9P0W8 599 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PSME2Q9UL46 239 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RIIAD1A6NNX1 92 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ULK1O75385 1050 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TGM6O95932 706 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RAP2AP10114 183 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SREBF1P36956 1147 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 MTHFRP42898 656 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ADAM8P78325 824 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 LAPTM5Q13571 262 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 BMPR2Q13873 1038 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 UBAP2LQ14157 1087 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GPR180Q86V85 440 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CHERPQ8IWX8 916 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 POU5F2Q8N7G0 328 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 KCTD4Q8WVF5 259 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 S100PBPQ96BU1 408 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 COMMD4Q9H0A8 199 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SETD4Q9NVD3 440 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 POLR3BQ9NW08 1133 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DDIT4Q9NX09 232 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ALG5Q9Y673 324 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 USP31Q70CQ4 1352 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CAPZA1P52907 286 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GABARAPL2P60520 117 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 FAAH2Q6GMR7 532 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PGBD2Q6P3X8 592 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 USP45Q70EL2 814 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF720Q7Z2F6 126 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF248Q8NDW4 579 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AURKBQ96GD4 344 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ALG2Q9H553 416 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 MARK1Q9P0L2 795 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SUCOQ9UBS9 1254 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF639Q9UID6 485 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 OR10H3O60404 316 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZBTB11O95625 1053 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ANXA5P08758 320 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ITGA4P13612 1032 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 FOSL1P15407 271 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 MTAPQ13126 283 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ADAM15Q13444 863 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ADGRE1Q14246 886 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 EIPR1Q53HC9 387 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HLA-DQA1Q5Y7H0 255 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GPRIN3Q6ZVF9 776 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF512Q96ME7 567 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RUSC1Q9BVN2 902 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AAASQ9NRG9 546 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AQP12BA6NM10 295 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 UROSP10746 265 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CTSKP43235 329 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GK3PQ14409 553 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms