RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TRPC1P48995 793 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 PLK1P53350 603 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 PITX1P78337 314 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 GBE1Q04446 702 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 USP4Q13107 963 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 NEDD8Q15843 81 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 LIN52Q52LA3 116 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 FBXL22Q6P050 247 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 MTSS1LQ765P7 747 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ZBTB18Q99592 522 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 LZTS3O60299 673 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 TRIM13O60858 407 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ALBP02768 609 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 VAV1P15498 845 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 NAGLUP54802 743 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 HTRA4P83105 476 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 GNA12Q03113 381 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 SULT2A1Q06520 285 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 MGAT5Q09328 741 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 PTP4A2Q12974 167 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 MPP2Q14168 576 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 CMTM8Q8IZV2 173 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 BHLHE22Q8NFJ8 381 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 TET1Q8NFU7 2136 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 OR7D4Q8NG98 312 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 RMND5BQ96G75 393 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-201ENST00000334136 PKP3Q9Y446 797 aa11.85□□□□□ -0.51
HDAC6-201ENST00000334136 F5P12259 2224 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 C1orf232A0A0U1RR37 186 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 IL1R2P27930 398 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 CDKN2BP42772 138 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 FOLH1Q04609 750 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PEX6Q13608 980 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 GSTA3Q16772 222 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PLD5Q8N7P1 536 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 RTL3Q8N8U3 475 aaKnown RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PHF21BQ96EK2 531 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 RTP3Q9BQQ7 232 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 OSBPL2Q9H1P3 480 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 ADAM7Q9H2U9 754 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 CSNK1G1Q9HCP0 422 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 DRG1Q9Y295 367 aaKnown RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 TPP1O14773 563 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 DGKGP49619 791 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 ARHGDIAP52565 204 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PARP15Q460N3 678 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 CCDC81Q6ZN84 652 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 RTL10Q7L3V2 364 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 METTL3Q86U44 580 aaKnown RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 EXOC2Q96KP1 924 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 GID8Q9NWU2 228 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PHGDHO43175 533 aaKnown RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 TTC3P53804 2025 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 MRPS15P82914 257 aaKnown RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 DPYSL2Q16555 572 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 PM20D1Q6GTS8 502 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 CHST9Q7L1S5 443 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 LPCAT1Q8NF37 534 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 TUBGCP3Q96CW5 907 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 SLC2A13Q96QE2 648 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 NR1H4Q96RI1 486 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-201ENST00000334136 MAGEH1Q9H213 219 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 LRRC40Q9H9A6 602 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 CD207Q9UJ71 328 aa11.84□□□□□ -0.51
HDAC6-201ENST00000334136 C2orf81A6NN90 581 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PRPF4O43172 522 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■■□ 24.5
HDAC6-201ENST00000334136 ITGAVP06756 1048 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 SERPINA4P29622 427 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 ECHS1P30084 290 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PTPN7P35236 360 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 GP5P40197 560 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 MAPKAPK2P49137 400 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 INPP1P49441 399 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 FNBP1LQ5T0N5 605 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TXNRD3NBQ6F5E7 133 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 CMASQ8NFW8 434 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 ZNF689Q96CS4 500 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 SEMA3CQ99985 751 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 ZDHHC6Q9H6R6 413 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PNPOQ9NVS9 261 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 A0A0A0MRY4 1105 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 MFSD11O43934 449 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms