RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 ABT1Q9ULW3 272 aaKnown RBP20.52■□□□□ 0.88
LINC01006-201ENST00000333319 UBFD1O14562 309 aaKnown RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 MAP3K13O43283 966 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 RNASEH1O60930 286 aaKnown RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 TRPA1O75762 1119 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 SUPT7LO94864 414 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 VNN2O95498 520 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 FGF1P05230 155 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 HLA-DPA1P20036 260 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 SLC26A3P40879 764 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 GATMP50440 423 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 ATXN3P54252 364 aaPredicted RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 XIAPP98170 497 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 ACVR1Q04771 509 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 RING1Q06587 406 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 DUSP4Q13115 394 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 GPR17Q13304 367 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 GRAMD1BQ3KR37 738 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 ZNF549Q6P9A3 640 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 LGI2Q8N0V4 545 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 PQLC1Q8N2U9 271 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 PTERQ96BW5 349 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 FEM1CQ96JP0 617 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 MRPL1Q9BYD6 325 aaKnown RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 TRAF6Q9Y4K3 522 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 ACTL7AQ9Y615 435 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 GREB1Q4ZG55 1949 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 CASP8AP2Q9UKL3 1982 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 A0A0D9SEW6 157 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 UBDO15205 165 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 UQCRBP14927 111 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 FGFR3P22607 806 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 GALNT1Q10472 559 aaPredicted RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 ZNF678Q5SXM1 525 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 CLEC6AQ6EIG7 209 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 RYBPQ8N488 228 aaPredicted RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 BHLHE22Q8NFJ8 381 aaPredicted RBP20.51■□□□□ 0.87
LINC01006-201ENST00000333319 HMGCLL1Q8TB92 370 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 EXT2Q93063 718 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 TRPC7Q9HCX4 862 aa20.51■□□□□ 0.87
LINC01006-201ENST00000333319 CCDC162PA2VCL2 907 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 ALDH2P05091 517 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 FDXRP22570 491 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 ALDH1A3P47895 512 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 MED21Q13503 144 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 SEMA3AQ14563 771 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 SPATA17Q96L03 361 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 PDFQ9HBH1 243 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 MARCH5Q9NX47 278 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 C6orf203Q9P0P8 240 aaPredicted RBP20.5■□□□□ 0.87
LINC01006-201ENST00000333319 PDP2Q9P2J9 529 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 BCAP29Q9UHQ4 241 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 NT5C1B-RDH14C9J2C7 533 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 F5H5T6 163 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 GPC4O75487 556 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 TCN1P20061 433 aaPredicted RBP20.5■□□□□ 0.87
LINC01006-201ENST00000333319 PEX19P40855 299 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 SQLEQ14534 574 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 ACBD5Q5T8D3 534 aaPredicted RBP20.5■□□□□ 0.87
LINC01006-201ENST00000333319 OGFRL1Q5TC84 451 aaPredicted RBP20.5■□□□□ 0.87
LINC01006-201ENST00000333319 MRNIPQ6NTE8 343 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 BRSK1Q8TDC3 778 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 CCDC167Q9P0B6 97 aa20.5■□□□□ 0.87
LINC01006-201ENST00000333319 CCDC189A1A4V9 331 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 PEX1O43933 1283 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 RPP40O75818 363 aaKnown RBP20.49■□□□□ 0.87
LINC01006-201ENST00000333319 EPOP01588 193 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 SERPINF2P08697 491 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 CD1DP15813 335 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 TIAL1Q01085 375 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC01006-201ENST00000333319 LAMB3Q13751 1172 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 PTK2BQ14289 1009 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 FASTKQ14296 549 aaKnown RBP20.49■□□□□ 0.87
LINC01006-201ENST00000333319 MMEL1Q495T6 779 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 AGKQ53H12 422 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 UNC50Q53HI1 259 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 RTP2Q5QGT7 225 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 PCDH20Q8N6Y1 951 aaKnown RBP20.49■□□□□ 0.87
LINC01006-201ENST00000333319 L3HYPDHQ96EM0 354 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 TRMOQ9BU70 441 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 ASB3Q9Y575 518 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 PCDHB7Q9Y5E2 793 aa20.49■□□□□ 0.87
LINC01006-201ENST00000333319 PSMD12O00232 456 aaPredicted RBP20.48■□□□□ 0.87
LINC01006-201ENST00000333319 MT-CO1P00395 513 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 ZDHHC11BP0C7U3 371 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 VCLP18206 1134 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 SLC11A1P49279 550 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 INHBCP55103 352 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 STX5Q13190 355 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 FUT10Q6P4F1 479 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 FAM156AQ8NDB6 213 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 ICA1LQ8NDH6 482 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 OR7D4Q8NG98 312 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 GPR150Q8NGU9 434 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 OR4L1Q8NH43 312 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 PEX13Q92968 403 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 CASD1Q96PB1 797 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 POLR3BQ9NW08 1133 aaPredicted RBP20.48■□□□□ 0.87
LINC01006-201ENST00000333319 ADA2Q9NZK5 511 aa20.48■□□□□ 0.87
LINC01006-201ENST00000333319 DTNAQ9Y4J8 743 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms