RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 CLCN5P51795 746 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 FOXA1P55317 472 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 ACAP2Q15057 778 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 SLC14A2Q15849 920 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 NRF1Q16656 503 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 IYDQ6PHW0 289 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 C1orf74Q96LT6 269 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 SP110Q9HB58 689 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 VPS45Q9NRW7 570 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 NOD1Q9Y239 953 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 A0A1B0GTL3 188 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 A0A1B0GVG6 124 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 WASH4PA8MWX3 477 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 CYBAP13498 195 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 FGFR3P22607 806 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 SH3BP2P78314 561 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 MYBPC1Q00872 1141 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 UNC50Q53HI1 259 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 ZNF598Q86UK7 904 aaKnown RBP13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 MON1AQ86VX9 555 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 FUNDC1Q8IVP5 155 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 OR13C4Q8NGS5 318 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 CENPKQ9BS16 269 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 GABRQQ9UN88 632 aa13.46□□□□□ -0.26
TUBA1B-201ENST00000332858 TRIM38O00635 465 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 TFAP2AP05549 437 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 HTR7P34969 479 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 ZNF157P51786 506 aaPredicted RBP13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 PRAMEP78395 509 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 GALNT3Q14435 633 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 ZNF678Q5SXM1 525 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 ZFP1Q6P2D0 407 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 METTL25Q8N6Q8 603 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 BLOC1S5Q8TDH9 187 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 STON2Q8WXE9 905 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 LRTOMTQ8WZ04 291 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 LPGAT1Q92604 370 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SLCO4A1Q96BD0 722 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 DNAJC1Q96KC8 554 aaKnown RBP13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 NSUN5Q96P11 429 aaKnown RBP13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SMIM14Q96QK8 99 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 C7orf72A4D263 438 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 GPC4O75487 556 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 TRPA1O75762 1119 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 RBP1P09455 135 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 RHOQP17081 205 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 IMPDH1P20839 514 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 KCNA10Q16322 511 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 UGT3A2Q3SY77 523 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 KLC3Q6P597 504 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 LARP4Q71RC2 724 aaKnown RBP eCLIP13.45□□□□□ -0.262e-22■■□□□ 14.4
TUBA1B-201ENST00000332858 CALML6Q8TD86 181 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 ASB9Q96DX5 294 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SEMA3CQ99985 751 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 LZTS1Q9Y250 596 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
TUBA1B-201ENST00000332858 H3BMM5 538 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 TRIM24O15164 1050 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 ATP6V1B1P15313 513 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 ZNF26P17031 533 aaPredicted RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 KPNA2P52292 529 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 RETREG3Q86VR2 466 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC7A4O43246 635 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 AP1G1O43747 822 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 TYMPP19971 482 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 RAB27AP51159 221 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NDST2P52849 883 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NRG1Q02297 640 aaPredicted RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 SQLEQ14534 574 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 OR4D1Q15615 310 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 CLLU1OSQ5K130 101 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 ZFAND2BQ8WV99 257 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 RANBP9Q96S59 729 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 TRIM8Q9BZR9 551 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 MFSD1Q9H3U5 465 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 IL1RL2Q9HB29 575 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 EML4Q9HC35 981 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 UTP6Q9NYH9 597 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 DNAJC15Q9Y5T4 150 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 LOC285095A0A1B0GVY8 99 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 UBXN8O00124 270 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 SNRPB2P08579 225 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms