RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 APOA4P06727 396 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 CDKN2DP55273 166 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 UBE3AQ05086 875 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 RETSATQ6NUM9 610 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 LCA5Q86VQ0 697 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 HEXDCQ8WVB3 486 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 MOCOSQ96EN8 888 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 PRR11Q96HE9 360 aaPredicted RBP17.93■□□□□ 0.46
ACTB-201ENST00000331789 ACSS2Q9NR19 701 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 IGSF5Q9NSI5 407 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 PNPOQ9NVS9 261 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 OXSMQ9NWU1 459 aa17.93■□□□□ 0.46
ACTB-201ENST00000331789 C2orf81A6NN90 581 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 TARM1B6A8C7 271 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 TRIM13O60858 407 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 CYBBP04839 570 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 PLEKHG6Q3KR16 790 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 ARHGAP15Q53QZ3 475 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 MRNIPQ6NTE8 343 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 ZNF549Q6P9A3 640 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 TMEM25Q86YD3 366 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 SKA1Q96BD8 255 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 LMLNQ96KR4 655 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 EVLQ9UI08 416 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 PCDHB9Q9Y5E1 797 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 GBF1Q92538 1859 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 FZD6O60353 706 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 FGF19O95750 216 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 BMP1P13497 986 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 DDX6P26196 483 aaKnown RBP eCLIP17.92■□□□□ 0.463e-35■■□□□ 11.9
ACTB-201ENST00000331789 CTSOP43234 321 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 ZBTB16Q05516 673 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 CSHL1Q14406 222 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 CLNKQ7Z7G1 428 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 TBC1D1Q86TI0 1168 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 ALYREFQ86V81 257 aaKnown RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 CAMK1DQ8IU85 385 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 RDH11Q8TC12 318 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 ACDQ96AP0 544 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 GATA5Q9BWX5 397 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 BPIFA1Q9NP55 256 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 XPR1Q9UBH6 696 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
ACTB-201ENST00000331789 MTF2Q9Y483 593 aaPredicted RBP17.92■□□□□ 0.46
ACTB-201ENST00000331789 PRAMEF12O95522 483 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 T-ENOLP0DO92 83 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 CTPS1P17812 591 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 LPOP22079 712 aaPredicted RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 TARSP26639 723 aaKnown RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 GKP32189 559 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 FBXW10Q5XX13 1052 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 ASTLQ6HA08 431 aaPredicted RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 TMEM207Q6UWW9 146 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 GRASPQ7Z6J2 395 aaPredicted RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 PIWIL2Q8TC59 973 aaKnown RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 PPP4R1Q8TF05 950 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 TSPAN17Q96FV3 270 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 RPL10LQ96L21 214 aaKnown RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 ZSWIM3Q96MP5 696 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 MTIF3Q9H2K0 278 aaKnown RBP17.91■□□□□ 0.46
ACTB-201ENST00000331789 TNKS2Q9H2K2 1166 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 LINC00597Q9H2U6 94 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 ABCB8Q9NUT2 735 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 TDP1Q9NUW8 608 aa17.91■□□□□ 0.46
ACTB-201ENST00000331789 DLX3O60479 287 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 UNC5CO95185 931 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 PIGNO95427 931 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 CCDC166P0CW27 439 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 PSMA3P25788 255 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 CDKN1CP49918 316 aaPredicted RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 PLK1P53350 603 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 TSNAXIP1Q2TAA8 658 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 PITRM1Q5JRX3 1037 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 PRSS36Q5K4E3 855 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 DGKKQ5KSL6 1271 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 RTL10Q7L3V2 364 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 SDCCAG8Q86SQ7 713 aaPredicted RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 PIM3Q86V86 326 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 KIF2BQ8N4N8 673 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 TTC30BQ8N4P2 665 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 TTC8Q8TAM2 541 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 ANKRD49Q8WVL7 239 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 SGF29Q96ES7 293 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 EBF4Q9BQW3 602 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 RASSF4Q9H2L5 321 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 GPAMQ9HCL2 828 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 SLC40A1Q9NP59 571 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 POLR3BQ9NW08 1133 aaPredicted RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 FKBPLQ9UIM3 349 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 HAO1Q9UJM8 370 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 ZNF821O75541 412 aaPredicted RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 CBX6O95503 412 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 OGNP20774 298 aaKnown RBP17.9■□□□□ 0.46
ACTB-201ENST00000331789 PMLP29590 882 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 HLA-FP30511 346 aa17.9■□□□□ 0.46
ACTB-201ENST00000331789 STK19P49842 368 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms