RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 POU5F1Q01860 360 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 GCNT1Q02742 428 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 DNASE1L3Q13609 305 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 ZNF267Q14586 743 aaPredicted RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 SLC25A24Q6NUK1 477 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 FAM220AQ7Z4H9 259 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PTAR1Q7Z6K3 402 aaPredicted RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PCSK9Q8NBP7 692 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PJA1Q8NG27 643 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 AKAP1Q92667 903 aaKnown RBP eCLIP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 C12orf43Q96C57 262 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 FAM84BQ96KN1 310 aaPredicted RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 ZSCAN5AQ9BUG6 496 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 UNKQ9C0B0 810 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 NEK6Q9HC98 313 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 POLR1DQ9Y2S0 133 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PCDHGA4Q9Y5G9 962 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PMPCBO75439 489 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 SLC2A3P11169 496 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 ZNF24P17028 368 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 CD97P48960 835 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PGDP52209 483 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 DEFA5Q01523 94 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 ALFQ53S48 1182 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 AHSA2Q719I0 299 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 HTR3CQ8WXA8 447 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 SYT15Q9BQS2 421 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PAK6Q9NQU5 681 aaPredicted RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 THG1LQ9NWX6 298 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 GDAP2Q9NXN4 497 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 GTF2A1LQ9UNN4 478 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 TBC1D30Q9Y2I9 924 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 CACNA1SQ13698 1873 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 DLG5Q8TDM6 1919 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 FAM25EA8MYX2 175 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 H0Y858 1186 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 HOXA2O43364 376 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 DNAJA2O60884 412 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 B3GAT3O94766 335 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 CPSF4O95639 269 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 GPIP06744 558 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 CYP2F1P24903 491 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 YWHAQP27348 245 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 GDI2P50395 445 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PSMD5Q16401 504 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 DCAF6Q58WW2 860 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 FBXO42Q6P3S6 717 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 KLHL35Q6PF15 583 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 SPIRE2Q8WWL2 714 aa5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 HOPXQ9BPY8 73 aaPredicted RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 TRIT1Q9H3H1 467 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 INTS10Q9NVR2 710 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 PPIEQ9UNP9 301 aaKnown RBP5.39□□□□□ -1.55
SDR42E1-201ENST00000328945 LOXHD1Q8IVV2 1947 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 SLIT1O75093 1534 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MANSC4A6NHS7 340 aaPredicted RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PLOD2O00469 737 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PGRMC2O15173 223 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 HBP1O60381 514 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MPZL2O60487 215 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 GLP2RO95838 553 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 BPGMP07738 259 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PRKACAP17612 351 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PBX1P40424 430 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 METTL21CQ5VZV1 264 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 C12orf50Q8NA57 414 aaPredicted RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 LPCAT1Q8NF37 534 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 TOP1MTQ969P6 601 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 REXO5Q96IC2 774 aaKnown RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MCCC1Q96RQ3 725 aaPredicted RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 DSN1Q9H410 356 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 UMPSP11172 480 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 S100A3P33764 101 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 SLC15A1P46059 708 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 SLC11A2P49281 568 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 E2F2Q14209 437 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PDIA6Q15084 440 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MIIPQ5JXC2 388 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 TMPRSS11AQ6ZMR5 421 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MACC1Q6ZN28 852 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 AGBL3Q8NEM8 1001 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 APOL2Q9BQE5 337 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 FICDQ9BVA6 458 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 CRISPLD1Q9H336 500 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 KLHL28Q9NXS3 571 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PRR12Q9ULL5 1215 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 MPDZO75970 2070 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 CASTOR2A6NHX0 329 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 EML1O00423 815 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 PLD2O14939 933 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 ENDOD1O94919 500 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 RPLP2P05387 115 aaKnown RBP5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 ZNF543Q08ER8 600 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 SMCO1Q147U7 214 aa5.38□□□□□ -1.55
SDR42E1-201ENST00000328945 ANKRD26P1Q6NSI1 321 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms