RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CDH22Q9UJ99 828 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 C3orf18Q9UK00 162 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 NOCTQ9UK39 431 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 CST3P01034 146 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 PIRTP0C851 137 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 HADHBP55084 474 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 RAET1GQ6H3X3 334 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF655Q8N720 491 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 UBASH3BQ8TF42 649 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 TLCD1Q96CP7 247 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 STXBP5LQ9Y2K9 1186 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 G3V2T6 193 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 GCATO75600 419 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 SPIBQ01892 262 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 MBTD1Q05BQ5 628 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 NR1D2Q14995 579 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 FASTKD3Q14CZ7 662 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ANXA8L1Q5VT79 327 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 LPCAT4Q643R3 524 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 GPR152Q8TDT2 470 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 MYO19Q96H55 970 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 SIX2Q9NPC8 291 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 RPTORQ8N122 1335 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 A0A0J9YYE9 177 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 TSPAN1O60635 241 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 PGK1P00558 417 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 FAM151BQ6UXP7 276 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 CLNKQ7Z7G1 428 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 CSGALNACT1Q8TDX6 532 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 IRGQQ8WZA9 623 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 SUSD6Q92537 303 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 NKD2Q969F2 451 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 POP5Q969H6 163 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 FANCEQ9HB96 536 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ZSCAN32Q9NX65 697 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 IGKV6D-41A0A0C4DH26 115 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 NDUFB5O43674 189 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 LRCH4O75427 683 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 PRDX6P30041 224 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 STX4Q12846 297 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 TEX44Q53QW1 395 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 REP15Q6BDI9 236 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ZFP28Q8NHY6 868 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 KLHL5Q96PQ7 755 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 FAIM2Q9BWQ8 316 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF510Q9Y2H8 683 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 GPR1P46091 355 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ABRQ12979 859 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 KCTD21Q4G0X4 260 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 MTX3Q5HYI7 312 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF572Q7Z3I7 529 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 CCDC185Q8N715 623 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 FAM13CQ8NE31 585 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 AGO3Q9H9G7 860 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 MRPL39Q9NYK5 338 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 FOXO6A8MYZ6 492 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 MSI1O43347 362 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 CD48P09326 243 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 BRCC3P46736 316 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 KLF10Q13118 480 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 PARP15Q460N3 678 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 RBFAQ8N0V3 343 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 NDRG1Q92597 394 aaKnown RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 EPB41L1Q9H4G0 881 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 PLGRKTQ9HBL7 147 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ASAH2Q9NR71 780 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF624Q9P2J8 865 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 E9PAM4 449 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 MDM4O15151 490 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 UMPSP11172 480 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 HDCP19113 662 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 CYP3A5P20815 502 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 CNSTQ6PJW8 725 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 MACC1Q6ZN28 852 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 OR52E6Q96RD3 313 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 SPATA5L1Q9BVQ7 753 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 OSBPL6Q9BZF3 934 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 OR6C75A6NL08 312 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC9A3R1O14745 358 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 TPP2P29144 1249 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 IL12RB1P42701 662 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 PTSQ03393 145 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 HLA-DQA1Q5Y7H0 255 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 ARHGAP36Q6ZRI8 547 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 EXOC2Q96KP1 924 aa10.93□□□□□ -0.66
SNRNP200-201ENST00000323853 VPS35Q96QK1 796 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms