RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 FOXP3Q9BZS1 431 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 SLC39A8Q9C0K1 460 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 ATP13A3Q9H7F0 1226 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 CBX8Q9HC52 389 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 FGF22Q9HCT0 170 aa14.29□□□□□ -0.12
RPP40-201ENST00000319533 ARHGAP42A6NI28 874 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 TRAFD1O14545 582 aaPredicted RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 MAST4O15021 2626 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 TEX33O43247 280 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 ITGB2P05107 769 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 HGFP14210 728 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 FERP16591 822 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 KELP23276 732 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 PAPOLAP51003 745 aaKnown RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 TPI1P60174 286 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 RFTN1Q14699 578 aaPredicted RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 TCEA2Q15560 299 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 TGIF1Q15583 401 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 C14orf28Q4W4Y0 310 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 CFAP58Q5T655 872 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 ACAD10Q6JQN1 1059 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 DPPA4Q7L190 304 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 C17orf82Q86X59 251 aaPredicted RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 SLITRK4Q8IW52 837 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 ARHGAP12Q8IWW6 846 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 MCOLN2Q8IZK6 566 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 SGF29Q96ES7 293 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
RPP40-201ENST00000319533 LOXL2Q9Y4K0 774 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 RNF215Q9Y6U7 377 aa14.28□□□□□ -0.12
RPP40-201ENST00000319533 ANKRD36A6QL64 1941 aa14.27□□□□□ -0.12
RPP40-201ENST00000319533 A0A1B0GTH6 734 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 A0A1W2PQC6 194 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 NUDT21O43809 227 aaKnown RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 WISP1O95388 367 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 PRKCGP05129 697 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 JMJD7P0C870 316 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 POLR2LP62875 67 aaKnown RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 B4GALNT1Q00973 533 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 TMPRSS9Q7Z410 1059 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 TAF8Q7Z7C8 310 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 LUZP1Q86V48 1076 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 GAS2L3Q86XJ1 694 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 DTX1Q86Y01 620 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 JAMLQ86YT9 394 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 FAM46DQ8NEK8 389 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 CELF6Q96J87 481 aaKnown RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 NSMCE3Q96MG7 304 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 SYT11Q9BT88 431 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 CLMPQ9H6B4 373 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 MRPL40Q9NQ50 206 aaKnown RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 LRIT1Q9P2V4 623 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 PISDQ9UG56 409 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 MYO6Q9UM54 1294 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 TLN1Q9Y490 2541 aaKnown RBP14.27□□□□□ -0.13
RPP40-201ENST00000319533 SPTA1P02549 2419 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 BOD1L1Q8NFC6 3051 aa14.27□□□□□ -0.13
RPP40-201ENST00000319533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 EEF2KO00418 725 aaKnown RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 PALMO75781 387 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 ELFN1P0C7U0 828 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 CD82P27701 267 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 ETV5P41161 510 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 NR1D2Q14995 579 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 CLPPQ16740 277 aaPredicted RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 CA9Q16790 459 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 TSR1Q2NL82 804 aaKnown RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 SPECC1LQ69YQ0 1117 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 PNCKQ6P2M8 343 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 DCUN1D2Q6PH85 259 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 USP53Q70EK8 1073 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 ZNF438Q7Z4V0 828 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 SFTPA2Q8IWL1 248 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 PELI3Q8N2H9 469 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 CBARPQ8N350 705 aaPredicted RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 ARFGAP1Q8N6T3 406 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 GPBAR1Q8TDU6 330 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 COQ10AQ96MF6 247 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 PSKH2Q96QS6 385 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 CMKLR1Q99788 373 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 LGR4Q9BXB1 951 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 TMEM168Q9H0V1 697 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 STARD5Q9NSY2 213 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 SEPT10Q9P0V9 454 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
RPP40-201ENST00000319533 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
RPP40-201ENST00000319533 PRAMEF33A0A0G2JMD5 474 aa14.25□□□□□ -0.13
RPP40-201ENST00000319533 C9orf172C9J069 976 aa14.25□□□□□ -0.13
RPP40-201ENST00000319533 PDE2AO00408 941 aaPredicted RBP14.25□□□□□ -0.13
RPP40-201ENST00000319533 B4GAT1O43505 415 aa14.25□□□□□ -0.13
RPP40-201ENST00000319533 SLC28A2O43868 658 aa14.25□□□□□ -0.13
RPP40-201ENST00000319533 PRAMEF10O60809 474 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms