RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PCDHGA7Q9Y5G6 932 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 TTC36A6NLP5 189 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 GOLGA8TH3BQL2 631 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 HTRA2O43464 458 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 CKMT2P17540 419 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 RHDQ02161 417 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 MPP3Q13368 585 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 NPAS4Q8IUM7 802 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 LZTR1Q8N653 840 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 LPGAT1Q92604 370 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 SLCO4A1Q96BD0 722 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 PPWD1Q96BP3 646 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 MFSD3Q96ES6 412 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 IGSF9Q9P2J2 1179 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 SUCOQ9UBS9 1254 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 VTI1BQ9UEU0 232 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 A0A1W2PQH9 124 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM189-UBE2V1I3L0A0 370 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 EEF2KO00418 725 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 PHGDHO43175 533 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 SBK3P0C264 359 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 PID1Q7Z2X4 250 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 DNAAF3Q8N9W5 541 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 HM13Q8TCT9 377 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 C12orf43Q96C57 262 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 WBP1LQ9NX94 342 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 PAIP2BQ9ULR5 123 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 SLC8A2Q9UPR5 921 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF638Q14966 1978 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 ZCWPW2A0A1B0GU75 182 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 ADAM12O43184 909 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 CPB1P15086 417 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 ESRRGP62508 458 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 CTBSQ01459 385 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 RNF19BQ6ZMZ0 732 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 CPNE9Q8IYJ1 553 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 LSMEM2Q8N112 164 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 TRPC4APQ8TEL6 797 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 CASP10Q92851 521 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 TSNARE1Q96NA8 513 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 IL22Q9GZX6 179 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 TLK1Q9UKI8 766 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-201ENST00000316097 TMX2-CTNND1H3BSU7 103 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 KCNK1O00180 336 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TIMM44O43615 452 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 BMP10O95393 424 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 AVPR1AP37288 418 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 HK2P52789 917 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 BTBD8Q5XKL5 378 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 HMBOX1Q6NT76 420 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 ZBTB49Q6ZSB9 765 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 GPR180Q86V85 440 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 CCNYL1Q8N7R7 359 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 ANKRD60Q9BZ19 345 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 IARS2Q9NSE4 1012 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM39AQ9NV64 488 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 OR12D3Q9UGF7 316 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 CDC14AQ9UNH5 594 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 FIS1Q9Y3D6 152 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 SLCO1B7G3V0H7 640 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TBX18O95935 607 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 APOA4P06727 396 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 ERCC2P18074 760 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 CCR3P51677 355 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 GRM3Q14832 879 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 EML3Q32P44 896 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 KCNMB4Q86W47 210 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 DCP1BQ8IZD4 617 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF786Q8N393 782 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM151AQ8N4L1 468 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 KCTD4Q8WVF5 259 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 SEPT5Q99719 369 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 PRDM12Q9H4Q4 367 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 CNOT6Q9ULM6 557 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM221A6NGB7 291 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 PSMD12O00232 456 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TIPRLO75663 272 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 COL6A1P12109 1028 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 HDCP19113 662 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 PSMD7P51665 324 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM135Q86UB9 458 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 VPS45Q9NRW7 570 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 DUS2Q9NX74 493 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 BFARQ9NZS9 450 aa17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 KLHL8Q9P2G9 620 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 RUVBL2Q9Y230 463 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-201ENST00000316097 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 CCDC78A2IDD5 438 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 PRORSD1PA6NEY8 169 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 VNN2O95498 520 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 MOCS2O96007 188 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 CXCL10P02778 98 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 ARSAP15289 507 aa17.23■□□□□ 0.35
SCAMP4-201ENST00000316097 DUSP4Q13115 394 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms